Pairwise Alignments

Query, 742 a.a., excinuclease ABC subunit UvrB from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 671 a.a., excinuclease ABC, B subunit from Pseudomonas stutzeri RCH2

 Score =  774 bits (1999), Expect = 0.0
 Identities = 390/668 (58%), Positives = 496/668 (74%), Gaps = 12/668 (1%)

Query: 39  RFRLETKYTPAGDQPAAIAELVAQAQAGDRDQVLLGVTGSGKTFTMAKVIEETQRPALIL 98
           +F L T++ PAGDQP AI +++   +AG   Q LLGVTGSGKTF++A VI   QRP L+L
Sbjct: 3   KFELVTRFKPAGDQPEAIRQMIEGIEAGLSHQTLLGVTGSGKTFSIANVIAHVQRPTLVL 62

Query: 99  APNKTLAAQLYSEFKSFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMR 158
           APNKTLAAQLY EFK+FFP+NAVEYFVSYYDYYQPEAYVP +DT+IEKD+SIN+ I++MR
Sbjct: 63  APNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMR 122

Query: 159 HSATRAILEREDVIVVASVSCIYGIGSVETYTAMTFTLKVGDQIDEAKLRADLIALQYKR 218
            SAT+A+LER D I+V +VSCIYG+G  ++Y  M   +  GD++D+ +L   L  LQY R
Sbjct: 123 LSATKALLERPDAIIVTTVSCIYGLGDPQSYLKMVLHVDRGDRLDQRELLRRLTGLQYTR 182

Query: 219 NDLNFDRGMFRKRGDVIEIFPVHLEDRAWRISLFGDELEAIQEFDPLTGKKTADLNEITV 278
           ND++F R  FR RGDVI+IFP   +  A RI LF DE+E++  FDPLTG+    L   T 
Sbjct: 183 NDMDFARATFRVRGDVIDIFPAESDLEAVRIELFDDEVESLSAFDPLTGEVIRKLPRFTF 242

Query: 279 YAASHYVTPRPTLNQAAAGIKAELKETLDWMVENGKLLEAQRLEQRTRFDLEMMEATGSC 338
           Y  SHYVTPR TL  A   IK EL+E LD++    KL+EAQRLEQRTRFDLEM+   G C
Sbjct: 243 YPKSHYVTPRETLLDAIEKIKDELRERLDYLRSQNKLVEAQRLEQRTRFDLEMIMELGYC 302

Query: 339 AGIENYSRWLTGRAPGEPPPTFFEYIPDNALLFVDESHVTIGQINGMFRGDYRRKSTLAE 398
            GIENYSR+L+GR  GEPPPT F+Y+P +ALL +DESHV++ Q+  M++GD  RK TL E
Sbjct: 303 NGIENYSRYLSGRDAGEPPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETLVE 362

Query: 399 YGFRLPSCIDNRPLKFEEWEAMRPQTVHVSATPGPWEMEQAGGVFVEQVIRPTGLIDPPV 458
           YGFRLPS +DNRP++F+EWEA+ PQT+ VSATPGP+E E AG V VEQV+RPTGL+DP +
Sbjct: 363 YGFRLPSALDNRPMRFDEWEAICPQTIFVSATPGPYEAEHAGRV-VEQVVRPTGLVDPQI 421

Query: 459 EIRPVSGKTRNQVDDVIDEVKATTAKGYRSLVTTLTKKMAEDLTEYMHEQGIRVRYMHSD 518
           E+RP       QVDD++ E++    K  R LVTTLTK+MAEDLT+Y+ +  +RVRY+HSD
Sbjct: 422 EVRP----ALTQVDDLLSEIRKCVVKEERVLVTTLTKRMAEDLTDYLSDHDVRVRYLHSD 477

Query: 519 VDTLERIEILRDLRLGTFDCLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTI 578
           +DT+ER+EI+RDLRLGTFD L+GINLLREGLD+PE  LVAILDADKEGFLRSE SLIQTI
Sbjct: 478 IDTVERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI 537

Query: 579 GRAARNVDGRVILYADRMTGSMERAIAETDRRRERQVAYNTEHGITPETVKRDIKEIMDS 638
           GRAARN++GR ILYAD +TGSM+RA+ ET+RRR +Q+A+N  +GI P+ V +D+++I++ 
Sbjct: 538 GRAARNLNGRAILYADNVTGSMQRAMDETERRRNKQIAFNEANGIVPKGVTKDVRDILEG 597

Query: 639 PY--ESREMDRLTKPGVAEASKPFVG-----SNFQAALRDLEGRMREAASNLEFEEAGRL 691
                SR   R  +   AE S  +       S     +R LE +M   A +LEFE A   
Sbjct: 598 ATVPGSRSKKRRGEAKAAEESARYENELRSPSEITKRIRQLEEKMLSLARDLEFEAAAEA 657

Query: 692 RDEIKRMK 699
           RDEI +++
Sbjct: 658 RDEIHKLR 665