Pairwise Alignments

Query, 742 a.a., excinuclease ABC subunit UvrB from Brevundimonas sp. GW460-12-10-14-LB2

Subject, 676 a.a., excinuclease ABC subunit UvrB from Vibrio cholerae E7946 ATCC 55056

 Score =  768 bits (1982), Expect = 0.0
 Identities = 387/669 (57%), Positives = 496/669 (74%), Gaps = 13/669 (1%)

Query: 40  FRLETKYTPAGDQPAAIAELVAQAQAGDRDQVLLGVTGSGKTFTMAKVIEETQRPALILA 99
           F L + Y PAGDQP AI +L+   +AG   Q LLGVTGSGKTFT+A VI   QRP +ILA
Sbjct: 5   FELVSDYQPAGDQPTAIKQLLEGLEAGLAHQTLLGVTGSGKTFTLANVIATAQRPTIILA 64

Query: 100 PNKTLAAQLYSEFKSFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRH 159
           PNKTLAAQLY E K+FFP+NAVEYFVSYYDYYQPEAYVP TDT+IEKD+S+N  I++MR 
Sbjct: 65  PNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIEQMRL 124

Query: 160 SATRAILEREDVIVVASVSCIYGIGSVETYTAMTFTLKVGDQIDEAKLRADLIALQYKRN 219
           SAT+A+LER+D ++VASVS IYG+G  ++Y  M   L+ GD I++  +   L  LQY RN
Sbjct: 125 SATKALLERKDAVIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQYSRN 184

Query: 220 DLNFDRGMFRKRGDVIEIFPVHLEDRAWRISLFGDELEAIQEFDPLTGKKTA-DLNEITV 278
           D+ F+RG FR RG+VI+IFP   +  A R+ +F DE+E I  FDPLTG  T+ DL   T+
Sbjct: 185 DMAFERGQFRVRGEVIDIFPAESDQEAVRVEMFDDEIECISLFDPLTGVITSRDLARFTI 244

Query: 279 YAASHYVTPRPTLNQAAAGIKAELKETLDWMVENGKLLEAQRLEQRTRFDLEMMEATGSC 338
           Y  +HYVTPR  + +A   IK+EL+    ++++N KLLE QR+ QRT+FD+EMM   G C
Sbjct: 245 YPKTHYVTPRERILEAIEQIKSELQVRRQYLLDNNKLLEEQRISQRTQFDIEMMNELGFC 304

Query: 339 AGIENYSRWLTGRAPGEPPPTFFEYIPDNALLFVDESHVTIGQINGMFRGDYRRKSTLAE 398
           +GIENYSR+L+GRA GEPPPT F+Y+P + LL +DESHVT+ QI  MF+GD  RK TL E
Sbjct: 305 SGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMFKGDRSRKETLVE 364

Query: 399 YGFRLPSCIDNRPLKFEEWEAMRPQTVHVSATPGPWEMEQAGGVFVEQVIRPTGLIDPPV 458
           +GFRLPS +DNRPLKF+E+EA+ PQT+ VSATP  +E+ ++GG   EQV+RPTGL+DP +
Sbjct: 365 FGFRLPSALDNRPLKFDEFEALAPQTIFVSATPSEYELTKSGGEVAEQVVRPTGLLDPII 424

Query: 459 EIRPVSGKTRNQVDDVIDEVKATTAKGYRSLVTTLTKKMAEDLTEYMHEQGIRVRYMHSD 518
           E+RPV+     QVDD++ E +   A   R LVTTLTK+MAEDLTEY+HE G++VRY+HSD
Sbjct: 425 EVRPVA----TQVDDLLSEARIRAANDERILVTTLTKRMAEDLTEYLHEHGVKVRYLHSD 480

Query: 519 VDTLERIEILRDLRLGTFDCLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTI 578
           +DT+ER+EI+RDLRLG FD L+GINLLREGLD+PE  LVAILDADKEGFLRSE SLIQT+
Sbjct: 481 IDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVALVAILDADKEGFLRSERSLIQTM 540

Query: 579 GRAARNVDGRVILYADRMTGSMERAIAETDRRRERQVAYNTEHGITPETVKRDIKEIM-- 636
           GRAARNV+G+ ILYAD +T SM +AI ET+RRRE+Q+AYN + GITP+ +KR +K+IM  
Sbjct: 541 GRAARNVNGKAILYADSITKSMRKAIDETERRREKQLAYNEQRGITPQPLKRSVKDIMEL 600

Query: 637 -DSPYESREMDRLTKP--GVAEASKPF---VGSNFQAALRDLEGRMREAASNLEFEEAGR 690
            D     ++ +    P   VAE S  +        +  +  LE  M + A NLEFE A +
Sbjct: 601 GDIAKSRKQKNSKVVPLAKVAEESAAYQVLTPQQLEKEISKLEAAMYQHAQNLEFELAAQ 660

Query: 691 LRDEIKRMK 699
            RDEI +++
Sbjct: 661 KRDEIHQLR 669