Pairwise Alignments

Query, 987 a.a., glycosyl hydrolase family 2, sugar binding domain protein from Bacteroides ovatus ATCC 8483

Subject, 1076 a.a., Beta-galactosidase (RefSeq) from Shewanella loihica PV-4

 Score =  102 bits (253), Expect = 2e-25
 Identities = 132/590 (22%), Positives = 230/590 (38%), Gaps = 89/590 (15%)

Query: 29  NFNSEWKLRIGDFPKAKDAKF-----DDSKWKQVTLP---------HAFNEDEAFKLSIE 74
           + N  W+  +   P A   +F     D S W  + +P         HA   DE +    +
Sbjct: 74  DLNGRWRFHLAKNPDATPKEFAAPEFDASHWGSIQVPGNFETQGYGHAIYLDERYPFDTK 133

Query: 75  QLT-----DTVVWYRKNFRIPELKSNQKVFVEFEGVRQRGDFYLNGHYLGRHENGVMAVG 129
                   +    YRK F +P     ++VF+     R     ++NG  +G  +       
Sbjct: 134 WPDAPSDHNPTGLYRKTFTLPAHWQQKQVFIHIGAARSALTLFVNGREVGYSQGAKTPAE 193

Query: 130 FDLTPHIKEGENVIAVRTDNDWMYREEGTNSKFQWNDRNFNANYG-----GIPKNVFLYV 184
           FD+TP+++ G+N++A++                +W+D ++  +       GI + V+LY 
Sbjct: 194 FDITPYLQAGDNLVAMQL--------------IRWSDASYLESQDMLRMTGIEREVYLYA 239

Query: 185 TDNVYQTLPLYSNLKTTGVYVYAQDFDIQGRKATIHAESEVRNDSKAPRQFSYQVSVLDA 244
           T            ++   V  +  + D+   K  I    ++ +     R    +  +LD 
Sbjct: 240 TPK--------QRIEDIQVVTHLNE-DLTRAKLAIRV--DIASHQPGVRALELEARLLDP 288

Query: 245 DGKLMKTFQGDKVTLKAGETKTVKASATLHNLHFWSWGYGYLYTVKTALKDDNNQVFDEV 304
            GK +      +++LK G+ K V  S TL +   W+     LY +   LK +  +     
Sbjct: 289 QGKPVAK-ANQRLSLK-GDAKPV-FSQTLISPKLWNAEMPNLYRLILTLKTEKGETLQVA 345

Query: 305 STRTGFRKTRFAEGKIWLNDRIIQMKGYAQRTSNEWPAVGLSVPAWLSDFSNDLMVKGNA 364
           S + G RK     G++ +N++ I ++G  +  ++  P  G  V     +    LM + N 
Sbjct: 346 SQQIGVRKIAIENGQLKVNNKAITIRGVDRHETD--PQTGHVVSRETMELDIRLMKQNNI 403

Query: 365 NLVRWMHVTPWKQDVESCDRVGL-------IQAMPAGDAEKDREGRQ--W----EQRVEL 411
           N VR  H       +   DR GL       I++ P    +K + G +  W    + R+E 
Sbjct: 404 NAVRSSHYPNHPYWLSLADRYGLYVIDEANIESHPLAIDDKTQLGNEMSWLPAHQARIER 463

Query: 412 MRDAIIYNRNNPSILFYECGNKAISR---EHMIEMKAVRDKYDPFGGRAIGSREMLDIRE 468
           M   +  ++N+PS++ +  GN+A      E + +    RD   P      G     DI  
Sbjct: 464 M---VERDKNHPSVIIWSLGNEAGEGKLFERLYQWIKRRDPNRPVQYEPAGEAPYTDIVA 520

Query: 469 AEYGG-EML--YINRSEHHPMWATEYCRDEG-----LRKYWDEY-SYPFHKEGDGPLYKG 519
             Y   E +  Y  R+   P+   EY    G     L+ YWD   +YP  + G    +  
Sbjct: 521 PMYPSIERIREYAERASDRPLIMIEYAHAMGNSVGNLQDYWDVIEAYPQLQGGFIWDWVD 580

Query: 520 QPATDYNRNQDELAITMIARWYDYWRERPGTGNRVSSGGTKIIFSDTNTH 569
           Q     N    +L     A   DY  + P  GN +++G   ++  D N H
Sbjct: 581 QALAFSN----DLGQRYWAYGKDYHPDMPTDGNFLNNG---LVDPDRNPH 623