Pairwise Alignments

Query, 381 a.a., transcriptional regulator, AraC family from Bacteroides ovatus ATCC 8483

Subject, 395 a.a., Xylose activator XylR (AraC family) from Pseudomonas fluorescens FW300-N2E2

 Score =  132 bits (333), Expect = 1e-35
 Identities = 96/390 (24%), Positives = 179/390 (45%), Gaps = 27/390 (6%)

Query: 3   KILLLIDYSSEFDRKLLRGLVQY-SKENGPWLFYRLPSYYSAMHGEQGILRWAKEWKADA 61
           +I LL + S  +DR ++ G+  Y S     W  +    +   + G        + W+ D 
Sbjct: 9   RIALLFNGSKIYDRGIISGIGNYLSSTRASWDLFLEEDFLCRLKG-------IERWQGDG 61

Query: 62  IIGQWNNDTI-DLQKELNIPVVL-------QNYHHRSVTYSNLTGDYKGTGRMAAQFFAK 113
           II  +++  I +    + +PVV        +  + + + Y     D   T  +A +   +
Sbjct: 62  IIADFDDPLIGEALAGIKLPVVAVGGSYQDERAYPKGIPYVATDNDALMT--LAYEHLIE 119

Query: 114 RMFRNFAYFGVKGVV---WSDERCEGYRQEVKRIG--GEFF---SFESDKQEDEIRMEVS 165
                FA F +       W+ ER + + + V+R G   E +      +   +  +  +++
Sbjct: 120 AGLTRFACFSLPEAQANRWAQEREKAFLRLVQRDGLHAEVYRGMGTSAPLWDSAVEQQIA 179

Query: 166 QWLQQLPKPVALFCCDDAHALFISETCKMTNIPIPEEIALLGVDNDELMCNISDPPISSI 225
            WLQ LPKP+ +    DA A  + + C    I +PEE+AL+G+DND L  +++  P+SS+
Sbjct: 180 -WLQSLPKPIGIIAVSDARARQLLQACLTAGIAVPEEVALIGIDNDPLTRSLTRVPLSSV 238

Query: 226 ELEVERGGYSIGRLIHQQIKKEHEGTFNIVINPIRIELRQSTEKHNIKDPYILEVVKYID 285
               E  G +  RL+HQ +         I+I P  I ++ S+    + +PY+++ + +I 
Sbjct: 239 IQGTETMGRTAARLLHQMLHGMPSTGTQILIPPDAINVQVSSLHQPLGNPYVMQALLFIR 298

Query: 286 SHYSSDLTIESLLANIPLSRRNFEVKFKNALNTSIYQYILNCRCNHLADLLLTTDRPLAD 345
            +    +    + A + +SR + E  F+     S++  IL  +    A+ L  T  P+AD
Sbjct: 299 QYACQGIKTAQVAAYVGVSRSSLESHFRKERGCSVHDEILRFKLAAAANGLENTHSPIAD 358

Query: 346 LAMEVGFTDYNNIARIFKKFKGCSPIEYRQ 375
           +A   GF     +  +F++  GC+P EY+Q
Sbjct: 359 IAQNCGFKSAQYLHTVFRREFGCTPREYQQ 388