Pairwise Alignments

Query, 194 a.a., electron transport complex, RnfABCDGE type, E subunit from Bacteroides ovatus ATCC 8483

Subject, 210 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella loihica PV-4

 Score =  126 bits (316), Expect = 3e-34
 Identities = 75/194 (38%), Positives = 108/194 (55%), Gaps = 6/194 (3%)

Query: 5   KVMMNGIIKENPTFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISLIKNLIPD 64
           +V+   II  NP  + +LG+C  L  TS     + M +A   V   SN+ IS+I+N IP 
Sbjct: 9   QVLTGPIISNNPIALQILGVCSALAVTSKMETALVMTIALTAVTALSNLFISMIRNHIPS 68

Query: 65  MVRIPSFIVVIASFVTLLQMVMQAYVPGLYATLGLFIPLIVVNCIVLGRAEAFAAKNNAV 124
            VRI   + +IAS V ++  V+QAY   +   L +F+ LI+ NCIV+GRAEA+A K   +
Sbjct: 69  SVRIIVQMTIIASLVIVVDQVLQAYAYDVAKQLSVFVGLIITNCIVMGRAEAYAMKTPPM 128

Query: 125 ASMFDGIGMGLGFTIALTLLGAVREFLGTGKIFDLTIMPE--EYGML----VFVLAPGAF 178
            S  DGIG GLG+   L  +G VRE  G G +F + I+ +  E G      + +L P AF
Sbjct: 129 MSFMDGIGNGLGYGAILLSVGFVRELFGNGSLFGVEILSKISEGGWYQPNGLLLLPPSAF 188

Query: 179 IALGYLIALINSFK 192
             +  LI +I + K
Sbjct: 189 FLIASLIWIIRTIK 202