Pairwise Alignments

Query, 194 a.a., electron transport complex, RnfABCDGE type, E subunit from Bacteroides ovatus ATCC 8483

Subject, 207 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella loihica PV-4

 Score =  122 bits (307), Expect = 3e-33
 Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 6/194 (3%)

Query: 6   VMMNGIIKENPTFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISLIKNLIPDM 65
           ++   I   NP  + +LG+C  L  ++S    + M LA  FVL+ SN++IS I+N IP+ 
Sbjct: 11  ILTGPIFANNPVAMQVLGVCSALAVSNSMQTALVMTLAVTFVLVFSNLIISSIRNFIPNS 70

Query: 66  VRIPSFIVVIASFVTLLQMVMQAYVPGLYATLGLFIPLIVVNCIVLGRAEAFAAKNNAVA 125
           VRI + + VIAS V ++ MV+Q     L   L +F+ LI+ NCI++GRAEAFA K     
Sbjct: 71  VRIIAQMTVIASLVIIVDMVLQDVAYELSRQLSVFVGLIITNCIIMGRAEAFAMKMPPHL 130

Query: 126 SMFDGIGMGLGFTIALTLLGAVREFLGTGKIFDLTIMP--EEYGML----VFVLAPGAFI 179
           ++ D +G  +G+ + L  +  VRE LG G +F   I+   E  G      +F L P AF 
Sbjct: 131 AVVDAMGNAMGYGVILLSVAFVRELLGAGTLFGHEILKTVENDGWYLANEMFKLPPSAFF 190

Query: 180 ALGYLIALINSFKK 193
            +G LI  IN  ++
Sbjct: 191 LIGLLIWAINVIQR 204