Pairwise Alignments

Query, 194 a.a., electron transport complex, RnfABCDGE type, E subunit from Bacteroides ovatus ATCC 8483

Subject, 232 a.a., NqrDE/RnfAE family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  195 bits (495), Expect = 6e-55
 Identities = 99/208 (47%), Positives = 139/208 (66%), Gaps = 15/208 (7%)

Query: 1   MNNFK-VMMNGIIKENPTFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISLIK 59
           M N++ +   G+ K NP  V  LG+CP L  T++  N +G+G+ATM VLI SNV+ISL++
Sbjct: 1   MTNYREIAWQGLWKNNPGLVQRLGLCPLLAVTTTLTNALGLGIATMLVLIGSNVLISLVR 60

Query: 60  NLIPDMVRIPSFIVVIASFVTLLQMVMQAYVPGLYATLGLFIPLIVVNCIVLGRAEAFAA 119
           + +P  +RIP F+++IA+ VT +Q+++ AY  GLY +LG+F+PLIV NCI++GRAEAFA+
Sbjct: 61  DYVPKEIRIPVFVMIIAALVTAVQLLVNAYAYGLYMSLGIFLPLIVTNCIIIGRAEAFAS 120

Query: 120 KNNAVASMFDGIGMGLGFTIALTLLGAVREFLGTGKIFD--------------LTIMPEE 165
           +NNA +S FDG+ MGLGFT+ L LLGA RE LG G +FD                +   +
Sbjct: 121 RNNAFSSAFDGLMMGLGFTLVLVLLGATREILGQGTLFDGADQLLGPWAKALTFQVWQVD 180

Query: 166 YGMLVFVLAPGAFIALGYLIALINSFKK 193
              L+ +L PGAFI +G LIAL N   K
Sbjct: 181 TSFLLAMLPPGAFIVMGLLIALKNVIDK 208