Pairwise Alignments

Query, 194 a.a., electron transport complex, RnfABCDGE type, E subunit from Bacteroides ovatus ATCC 8483

Subject, 206 a.a., NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  123 bits (309), Expect = 2e-33
 Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 6/189 (3%)

Query: 11  IIKENPTFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISLIKNLIPDMVRIPS 70
           +   NP  + +LG+C  L  ++S    + M LA  FVL+ SN++IS I+N IP+ VRI +
Sbjct: 15  VFANNPVAMQVLGVCSALAVSNSMQTAVVMTLAVTFVLVFSNLIISAIRNFIPNSVRIIA 74

Query: 71  FIVVIASFVTLLQMVMQAYVPGLYATLGLFIPLIVVNCIVLGRAEAFAAKNNAVASMFDG 130
            + VIAS V ++ MV+Q     L   L +F+ LI+ NCI++GRAEAFA K     ++ D 
Sbjct: 75  QMTVIASLVIIVDMVLQDVAYELSKQLSVFVGLIITNCIIMGRAEAFAMKYPPHLAVVDA 134

Query: 131 IGMGLGFTIALTLLGAVREFLGTGKIFDLTIMP--EEYGML----VFVLAPGAFIALGYL 184
           +G   G+ + L  +  VRE LGTG +F  +++   E  G      +F L P AF  +G L
Sbjct: 135 VGNAAGYGLVLISVAFVRELLGTGNLFGHSVLTTVENGGWYLPNEMFKLPPSAFFLIGLL 194

Query: 185 IALINSFKK 193
           I  IN  ++
Sbjct: 195 IWSINVIQR 203