Pairwise Alignments

Query, 194 a.a., electron transport complex, RnfABCDGE type, E subunit from Bacteroides ovatus ATCC 8483

Subject, 191 a.a., NADH:quinone oxidoreductase subunit RnfA (Shelley Haveman) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 92.0 bits (227), Expect = 6e-24
 Identities = 56/162 (34%), Positives = 90/162 (55%), Gaps = 6/162 (3%)

Query: 1   MNNFKVMMNGIIKENPTFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISLIKN 60
           M+ F++ ++ I   N      LG CP LG +      +GMG A +FV+I + +   LI+ 
Sbjct: 1   MDVFEIFISAIFVNNIVLAQYLGNCPYLGCSREKGVALGMGAAVVFVIIMATLCTWLIQY 60

Query: 61  --LIP-DMVRIPS--FIVVIASFVTLLQMVMQAYVPGLYATLGLFIPLIVVNCIVLGRAE 115
             L+P D+  + +  FI+VIA  V  ++M ++  VP LYA LG+F+PLI  NC V+G   
Sbjct: 61  HVLVPFDLAYLQTIVFILVIAGLVQFVEMFLKKMVPPLYAALGIFLPLITTNCAVMGVTI 120

Query: 116 AFAAKN-NAVASMFDGIGMGLGFTIALTLLGAVREFLGTGKI 156
               +  + + S+  G+   LGF +AL L+  +RE L T ++
Sbjct: 121 LVQREEYDLMTSLTYGLASSLGFVLALLLMAGIRERLDTARV 162