Pairwise Alignments

Query, 333 a.a., transposase, IS116/IS110/IS902 family from Bacteroides ovatus ATCC 8483

Subject, 321 a.a., transposase from Sinorhizobium meliloti 1021

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 80/324 (24%), Positives = 143/324 (44%), Gaps = 25/324 (7%)

Query: 8   GIDISKKTLDVVIYVPTKKHADETNYERFLNKEEGYKSLLCWLKKKNMAKKRLVISMENT 67
           GID  K  LDV  Y  + K       ++  N  +G+++L  WL+++ + +    + +E +
Sbjct: 10  GIDTGKIWLDVATYPVSDK-------QKVPNNADGWQTLADWLERQGIGR----VGIEAS 58

Query: 68  GIYSFDLCLFLEAASIDYCSFNPLHLKRSLGLV---RGKNDRVDAERIAYFAYLHRDELS 124
           G Y  D+  +L     +     P  + R+ GL    R KND++DA  IA  A    D   
Sbjct: 59  GGYERDVIAYLHQRGFEVVLLQPRQV-RAFGLYKLRRAKNDQLDAALIAECA-ARSDARC 116

Query: 125 YSKLSGSSIIRLRDFAAERKRFVKQ-QAEYKGFLTDRKDCEMTSTIERAAHMVKILDEEI 183
           ++  S     RL  F  E   F++Q +A+     T R+       +E     +  L    
Sbjct: 117 HAPDS-----RLIAFG-EWLLFIEQIEADIACLKTRRERFTDRWILEEIDRSIGELKSRC 170

Query: 184 ASVEEEMLQIINSDPSILRNYELLNSIKGIGTINAMNTIIHTNNFQAFETARQYACYLGI 243
            +    +   +     + R  +L+ SI GIG   A+  +I        +   + A   G+
Sbjct: 171 KAQLALLQAAVREHDDLARKLDLIESIDGIGIRTALTLVILMPELGRVDR-EEIAALTGV 229

Query: 244 APFEHSSGTSIKGKTRVYPTGAKLLKADLSQAANSAIVWDKEMKEYYERKRKEGKAYGVV 303
           AP++  SG   +G+  +    A++ +A  + A  ++  W++ + E Y+R   +GK++   
Sbjct: 230 APYDDQSGKR-EGERHIAGGRARVRRALFNAALPASQRWNETLVELYDRLTAKGKSHKAA 288

Query: 304 LNAVKFKLVGRMFAVVKRGTPFVE 327
           L A   KL+     VVKR TP+ +
Sbjct: 289 LIACVRKLIIFANTVVKRQTPWTK 312