Pairwise Alignments

Query, 693 a.a., DNA primase from Bacteroides ovatus ATCC 8483

Subject, 601 a.a., DNA primase (RefSeq) from Shewanella loihica PV-4

 Score =  241 bits (614), Expect = 1e-67
 Identities = 129/361 (35%), Positives = 203/361 (56%), Gaps = 9/361 (2%)

Query: 7   IDRILDAAQIMDVVSDFVTLRKRGVNYVGLCPFHSDKTPSFYVSPAKGLCKCFACGKGGN 66
           I+ ++    I+D++   V L+K G N+   CPFHS+K+PSF VS  K    CF CG  GN
Sbjct: 34  INELVARTDIVDLIDAKVPLKKAGKNHSACCPFHSEKSPSFTVSRDKQFYHCFGCGAHGN 93

Query: 67  AVHFIMEHEQMSYPEALKYLAKKYNIEIKERELSDEEKFVQSERESLFIVNNFARDYFQN 126
           A+ F+ME++++ + +A++ LA +  +E+  RE    ++  +     L+ +   A  YFQ+
Sbjct: 94  AIDFVMEYDRLDFVDAIEELAGRLGLEVP-REQGTGKRRDEGLSRDLYQLMEEASRYFQS 152

Query: 127 ILKNHVDGRSIGMAYFRNRGFRDDIIEKFQLGYCTEAHDAFAKEAIQKGYKKEYLVKTGL 186
            LK H D + + + Y  +RG  D++IE F +G+  +  D       Q    ++ L+  G+
Sbjct: 153 QLKQHTDKQKV-LDYLAHRGLSDEVIEHFNIGFAPDGWDGLLGRYRQNQDAQDKLLTAGM 211

Query: 187 CYETDDHRLRDRFWGRVIFPVHTLSGKVVAFGGRVLASATKGVKVKYVNSPESEIYHKSN 246
             E D  +  DRF  R++FP+    G+V+ FGGRVL   T     KY+NSPE+ I+HK  
Sbjct: 212 VIENDSGKRYDRFRDRLMFPIRDRRGRVIGFGGRVLGDGTP----KYLNSPETPIFHKGY 267

Query: 247 ELYGIYFAKQAIVKQDRCFLVEGYTDVISMHQSGIENVVASSGTALTPGQIRMIHRFTNN 306
           ELYG+Y  KQ      +  +VEGY DV+++ Q G++  VAS GT+ T  Q +++ R    
Sbjct: 268 ELYGLYELKQRHRDPSQILIVEGYMDVVALTQFGVDYAVASLGTSTTADQFQLLLRSAKE 327

Query: 307 MTVLYDGDAAGIKASIRGIDM---LLEEGMNIKVCLLPDGDDPDSFARKHNSTEFQTFIS 363
           +   YDGD AG +A+ R ++    LL+ G  +K   LP G+DPDS  R+     F+  I+
Sbjct: 328 VICCYDGDKAGTEAAWRALETALPLLKPGDQVKFMFLPQGEDPDSLVRQIGKPAFEQLIA 387

Query: 364 E 364
           E
Sbjct: 388 E 388