Pairwise Alignments

Query, 710 a.a., Tex-like protein N-terminal domain protein from Bacteroides ovatus ATCC 8483

Subject, 787 a.a., RNA-binding S1 domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  637 bits (1643), Expect = 0.0
 Identities = 337/720 (46%), Positives = 482/720 (66%), Gaps = 16/720 (2%)

Query: 1   MELFHKMISGFLGIPERQISSTLHLLGEGATIPFISRYRKEATGGLDEVQIEQIKEQHDK 60
           M+   K+I+  L + E+Q+++T+ LL +GAT+PF++RYRKE TGGLD+ Q+  +  +   
Sbjct: 1   MQNIAKIIAQELNVREQQVTATITLLDDGATVPFVARYRKEVTGGLDDTQLRTLYSRLGY 60

Query: 61  LCDIAKRKETILGTINEQGKLTAELEKRINDTWNPTELEDIYLPYKPKRKTRAEVARQKG 120
           L ++  R++ IL +I  QGKLTAEL+  I+   + T LED+YLPYKPKR+T+ ++A + G
Sbjct: 61  LRELNDRRQVILSSIQAQGKLTAELQAAIDQADSKTRLEDLYLPYKPKRRTKGQIAIEAG 120

Query: 121 LEPLATILMLQRENNLSTKAASFVKGD--VKDVEDALKGARDIIAEQVNEDERARNTVRN 178
           +EPL   L+  R+ ++   A+ ++  +  + +V+  L GAR I+ E+  ED      VR 
Sbjct: 121 IEPLVDRLLSDRQADIEALASEYLNAEAGLDEVKAVLDGARFILMERFAEDAELLQKVRQ 180

Query: 179 QFSRQAEISAKVVKGKEEEAAKYRDYFDFSEPLKRCTSHRLLAIRRAESEGVLKVSINPD 238
             ++ A + + VVKGKE+E AK+RDYF+ SE L    SHR LA+ R  +EGVL +S+N D
Sbjct: 181 HLTQIAVLESHVVKGKEKEGAKFRDYFEHSEKLMNVPSHRALAMLRGRNEGVLSLSMNAD 240

Query: 239 DEACIERLERQFVRGNNECSQQVDEATVDAYKRLLKPS---------IETEFAAQSKEKA 289
            ++  +      V   +  + ++ ++ VD + +L+  S         +ETEF A+ +E+A
Sbjct: 241 PDSEAKSGSYCEVIIADHFNLKLSDSAVDQWLKLVVTSTWRIKIALQMETEFIAKLRERA 300

Query: 290 DEEAIRVFTENLRQLLLAPPLGQKRVLAIDPGFRTGCKVVCLDAQGNLLHNENIYPHPPV 349
           + EAI VF  NL  LL+A P G K  L +DPG RTG KV  ++  G L+ +  I+PH P 
Sbjct: 301 ETEAINVFARNLGDLLMAAPAGAKATLGLDPGLRTGVKVAIVNNTGKLMAHTTIFPHAPQ 360

Query: 350 NKTGEAASKLRKMIEAYQIEAISIGNGTASRETEDFINS--QSFDRQIPVF---VVSEQG 404
           N+  ++   L  +++ +++E I+IGNGTASRET+            ++P     +VSE G
Sbjct: 361 NQWDKSIRTLANLVKMHKVELIAIGNGTASRETDKLAGELIAELKSELPTLTKIMVSEAG 420

Query: 405 ASIYSASKIARDEFPDYDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQTKL 464
           AS+YSAS++A +EFP+ DV++RGAVSI RRL DPLAELVKI+PKSIGVGQYQHDV Q++L
Sbjct: 421 ASVYSASELAAEEFPELDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQSQL 480

Query: 465 KKALDQTVENCVNLVGVNLNTASSHLLTYISGLGPQLAQNIVNYRAENGAFGSRKELMKV 524
            ++L+  VE+CVN VGV+LN AS  LLT ++GL   LA+NIV YR +NG F SRK+L+KV
Sbjct: 481 SQSLEAVVEDCVNGVGVDLNMASMPLLTQVAGLNKTLARNIVEYRDQNGQFTSRKQLLKV 540

Query: 525 PRMGAKAFEQCAGFLRIPGAKNPLDNTAVHPESYHIVEQMAKDLKCTIDELIADKELRRK 584
           PR+G KAFEQ AGFLRI    NPLD +AVHPE+Y +VE +AK  +  +D LI + +L ++
Sbjct: 541 PRLGPKAFEQAAGFLRIREGDNPLDASAVHPETYALVESIAKAQQQAVDALIGNTDLLKQ 600

Query: 585 INISAYITPTVGLPTLQDILQELDKPGRDPRKAIKVFEFDKNVRTIADLREGMILPGIVG 644
           I+  A++T   GLPT++DIL ELDKPGRDPR   K   F + V  I DL+  MIL G+V 
Sbjct: 601 IDAKAFVTEEFGLPTIEDILSELDKPGRDPRGEFKTAVFKEGVEEIKDLKVEMILEGVVT 660

Query: 645 NITNFGAFVDIGIKENGLVHLSQLAERFISDPTEVVSIHQHVMVRVMNVDYDRKRIQLSM 704
           N+TNFGAFVDIG+ ++GLVH+S L ++F+SDP  VV     V V+VM VD +RKRI L+M
Sbjct: 661 NVTNFGAFVDIGVHQDGLVHISSLTDKFVSDPHTVVKAGDVVKVKVMEVDAERKRISLTM 720