Pairwise Alignments

Query, 331 a.a., TRAP transporter substrate-binding protein from Bosea sp. OAE506

Subject, 326 a.a., TRAP dicarboxylate transporter, DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  150 bits (380), Expect = 3e-41
 Identities = 95/333 (28%), Positives = 171/333 (51%), Gaps = 19/333 (5%)

Query: 1   MTITRRSALAAAGAGLGLFAIGRPAFGQA-AKLRFAHPHPESDSWHKAALQLAEKVKAKS 59
           MT +R + +AAA A L       PA   A A ++     PE    H    +  ++++A +
Sbjct: 1   MTTSRLALIAAASAML------MPAAAAAEAVMQINSSLPEGSFAHVFLQEYEQRLEAAA 54

Query: 60  GGKVEIQVFPNGSLGSDSQTISAVRGGSLDICLTGNPFFTGLAPKLNVLDLPFLFQSRKH 119
            G++++Q+F + +LG +   +  +  G+    L+ +     +  + ++ DLP+LF+ R  
Sbjct: 55  PGEIDVQIFMSNTLGKEEDVLQGLGFGTHQASLSASAV-AQVNNRTSIFDLPYLFEDRAA 113

Query: 120 AAAVMDGAIGDGLRKELEGSNLKALATWEIGWRNLTNSRRPVATAADIKGLKIRTTPNPA 179
               +D   G+ L    + + +   A W+ G+R +TN+ RP+ T AD+ GLKIRT  N  
Sbjct: 114 VQTFIDSPAGEMLADGFDVTGMVLAAMWDNGFRQITNNVRPIVTPADLDGLKIRTPTNRQ 173

Query: 180 HIRAFQLLGAVPTPMAFTELFSALETGAVDGQENPVTLILNAKFSEVQKHLSLTRHAFTT 239
            +  F  LGA  TP++F E++SAL+ G +DGQENP  ++  AK  EVQ ++SLT H +  
Sbjct: 174 RVEMFNTLGANATPLSFGEVYSALDQGTIDGQENPANVVETAKLFEVQGYMSLTNHVYLP 233

Query: 240 GPVVMNKAKFDALDADIQKILTSTAIEIAAIQRQMNEDTEGSSLAALKK---------AG 290
              V+ +   ++L  ++++ + S A E+     +  E ++  ++AAL++         A 
Sbjct: 234 TFFVIGEPFLNSLTPELRETVISVAKEVGPWSFEWGEKSDTETIAALQEKLEVNEIDFAA 293

Query: 291 MQAVENP--DRESFSKIVTAEVEKEFVTKFGGE 321
            Q+   P  D  +F  ++ A++     T  G E
Sbjct: 294 FQSAAAPLYDSPTFVDVIGADMIAATKTALGIE 326