Pairwise Alignments

Query, 296 a.a., LysR family transcriptional regulator from Bosea sp. OAE506

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (353), Expect = 4e-38
 Identities = 99/263 (37%), Positives = 132/263 (50%), Gaps = 11/263 (4%)

Query: 9   RLPSLKALRAFEAAARLESFTEAAAELGVTPGAVTQQIRQLEAALGLSLFRRLPQGVVPT 68
           RLP L A++AFEAAAR  SFT AA EL VT  AV+ QI+ LE  LGL LFRR  + ++ T
Sbjct: 4   RLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSLLLT 63

Query: 69  VAAREVLPRLTRGFDILAQAAQSLRESESQRALTIAALPCIAQLWLSPRLPALQRAWPDL 128
              +     +   F  LA A   L    +  +LT++  P  A  WL PRL       PD+
Sbjct: 64  EEGQSYFLDIKDIFTQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLSKFSEKNPDI 123

Query: 129 QVSISAMEAPPDPRREPHDLSIFY---REPGSGPQVLTLPGEDAILPVCAPSL---GERI 182
            V I A++       +  D++I+Y     PG     L     + ++PVC+P L    + +
Sbjct: 124 DVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLR---NEVLIPVCSPMLLNGPKPL 180

Query: 183 GTTADLAGQTLLHDAVWQSDWARWLAQTGAPRSLDATRGPRFSLYSLALDAALTGSGVLM 242
               DL   TLLHD + + DW  W  Q G    ++  +GP FS  SL L AA  G GV +
Sbjct: 181 SKPEDLKYHTLLHD-MSRHDWQAWFRQCGI-HDINVNQGPIFSHSSLVLQAAAHGQGVAL 238

Query: 243 GRLSLVAPLLAQGRLVAPLQPPL 265
           G   L  P +  GRLV P Q  L
Sbjct: 239 GYSVLARPDIKAGRLVCPFQEVL 261