Pairwise Alignments

Query, 294 a.a., cytochrome-c oxidase, cbb3-type subunit III from Bosea sp. OAE506

Subject, 322 a.a., cytochrome c oxidase, cbb3-type, subunit III (RefSeq) from Shewanella sp. ANA-3

 Score =  165 bits (417), Expect = 1e-45
 Identities = 109/295 (36%), Positives = 149/295 (50%), Gaps = 40/295 (13%)

Query: 20  GHEWDGIRELNTPLPRWWLGIFYATIVWSVGYWVVYPA---------WPLIT---GATKG 67
           GH +DGI ELN PLP+WW  +FY TIV+ + Y  ++P          W       G  KG
Sbjct: 41  GHSFDGIEELNNPLPKWWSYMFYITIVFGLVYLALFPGLGNYKGLLNWTSSNQSIGTEKG 100

Query: 68  V-IGYASRIEIAKDLALLQQH-----RATQSSGLAEAS-----LEQIKADPSLFRIAMAQ 116
           +    A+ IE+A    +  Q+      A +  G   A+     LE++  +    ++    
Sbjct: 101 IKADSAAAIELAAKEGMYVQYDQEVKHANEKYGPIFAAYLATPLEELVKNQEALKV---- 156

Query: 117 GKAAFGDNCAACHGVGGGGSKGYPNLNDDDWLWGGTLAEIHQTLQNGVRVAGNADSRISQ 176
           G   F  NCA CHG    GSKG+PNL D DWL+GG LA I  T+ NG         R   
Sbjct: 157 GGRLFLQNCAQCHGSDARGSKGFPNLTDSDWLYGGDLATIKTTIMNG---------RHGM 207

Query: 177 MPAFGKDGV-LKPAEIRAVANHVRELAGLPTEQGADLVKGRELFATNCAACHGDAGKGNK 235
           MP   K G+ +  +EI  +A +V +L+G   ++     +G+  F   C ACHG   KGNK
Sbjct: 208 MPP--KGGLPIDDSEIAGLAEYVVKLSGREHDEKL-AAQGQGSFMKGCFACHGMDAKGNK 264

Query: 236 ELGAPNLSDAISLYGMDMASLTETITNSRAGVMPAWGQRLDPTTVKALTIYVHSL 290
            +GAPNL+D + LYG     + ETI + RAGVMPAW   L    V  +  YV+SL
Sbjct: 265 LMGAPNLTDDVWLYGGSRGMIEETIKHGRAGVMPAWKDVLGEEKVHVIAAYVYSL 319