Pairwise Alignments

Query, 315 a.a., tRNA pseudouridine(55) synthase TruB from Bosea sp. OAE506

Subject, 300 a.a., tRNA pseudouridine 55 synthase from Dechlorosoma suillum PS

 Score =  217 bits (552), Expect = 3e-61
 Identities = 125/295 (42%), Positives = 169/295 (57%), Gaps = 6/295 (2%)

Query: 19  PRPKKRDVHGWVVLDKPVGMTSTHAVAVVKRAFAAKKAGHAGTLDPLASGLLPIALGEAT 78
           PR   + V G ++LDKP+ ++S  A+   +R F+A KAGH GTLDPLA+GLLPI  GEAT
Sbjct: 4   PRRTWKQVDGVLLLDKPLHLSSNDALQKARRFFSAAKAGHTGTLDPLATGLLPICFGEAT 63

Query: 79  KTVPFVMDGRKAYQFTVSWGSQTDTDDTEGKVIATSDARPDEAAIAALLPRFTGTISQVP 138
           K    ++D  KAY   V  G  T T D EG+++ T   +     +AA+LPRFTG I+QVP
Sbjct: 64  KFSADLLDADKAYVADVRLGQTTATGDAEGEILQTRPVQVSAEQLAAVLPRFTGVIAQVP 123

Query: 139 PKFSAIKIAGERAYDLARDGEEVVLEARPVEIDALRIVAHDGATTTFEAECGKGTYVRAI 198
           P +SA+K  G+  Y+LAR G EV  EAR V I +L     DG       +C KGTY+R +
Sbjct: 124 PMYSALKRDGKPLYELARQGLEVEREAREVTILSLAASDFDGVNFRLHVDCSKGTYIRTL 183

Query: 199 ARDLGLALGCLGHVAHLRRTRVGPFGIADATSVETLRKSAESAAGA-LQPVMAALSLIPE 257
           A D+G ALGC  H+  LRRTRVGP  +  A S+  L  + E+  G  L PV A L  +PE
Sbjct: 184 AEDIGEALGCGAHLTGLRRTRVGPLELDRAVSLAELENTEEADRGRYLLPVDALLRSLPE 243

Query: 258 IAINRDAAMRLKRGQSVLLRGRDALPASPAVYATCGGVLIAIGAVEQGEFVPHRV 312
           + +  ++  R   G  V     +       VY    GVL  +G V +G+  P+R+
Sbjct: 244 VLLEAESLQRFAHGNPV---ATELQSGKARVYGE--GVLQGVGEVREGKLWPYRL 293