Pairwise Alignments

Query, 315 a.a., tRNA pseudouridine(55) synthase TruB from Bosea sp. OAE506

Subject, 304 a.a., tRNA pseudouridine synthase B (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  149 bits (375), Expect = 1e-40
 Identities = 91/247 (36%), Positives = 130/247 (52%), Gaps = 3/247 (1%)

Query: 27  HGWVVLDKPVGMTSTHAVAVVKRAFAAKKAGHAGTLDPLASGLLPIALGEATKTVPFVM- 85
           HG +VLDKP G +S   ++ VKR    KK GHAGTLDP+A G+L + LG ATK    +M 
Sbjct: 6   HGLLVLDKPSGPSSAQCISKVKR-LGQKKIGHAGTLDPMAGGVLLVLLGHATKISGHLMA 64

Query: 86  DGRKAYQFTVSWGSQTDTDDTEGKVIATSD-ARPDEAAIAALLPRFTGTISQVPPKFSAI 144
           DG K Y  T+  G  TDT D EG V AT+      EA + A++  + G+  Q  P +SA 
Sbjct: 65  DGEKVYAGTLRLGETTDTWDAEGTVTATAPWHHVTEADVRAIVDSWLGSSEQEVPPYSAA 124

Query: 145 KIAGERAYDLARDGEEVVLEARPVEIDALRIVAHDGATTTFEAECGKGTYVRAIARDLGL 204
           K  G+  Y L+R G E  ++ + VEI    +V  D     F   C  GTY+R++A  LG+
Sbjct: 125 KHQGQPLYKLSRAGRETPVKTKTVEISLAEVVWCDLPHVRFRVRCSSGTYIRSLAHSLGI 184

Query: 205 ALGCLGHVAHLRRTRVGPFGIADATSVETLRKSAESAAGALQPVMAALSLIPEIAINRDA 264
            LGC   +  L R    PFG+  A +++ +       A  + P+  AL   P++ I+   
Sbjct: 185 RLGCGAVLTELTREYSHPFGLDMAHTLDAVLAEPGRLAERVIPITHALPHWPKVGISLQQ 244

Query: 265 AMRLKRG 271
              ++ G
Sbjct: 245 EASVRNG 251