Pairwise Alignments

Query, 1016 a.a., DNA polymerase I from Bosea sp. OAE506

Subject, 1015 a.a., DNA polymerase I (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  328 bits (840), Expect = 2e-93
 Identities = 190/442 (42%), Positives = 262/442 (59%), Gaps = 5/442 (1%)

Query: 575  LDKATDYAAEDADVTLRLWRTLKPRLAAEGRTTVYETLERPLIAVLARMEAHGISIDRQI 634
            LD++TD       + L + + +  RLA     T+  TLE PL+ VLA ME  GI++DR  
Sbjct: 579  LDRSTD---NPGLLALEMAQGMAGRLAGASLDTLMRTLELPLVPVLADMEEAGIAVDRTA 635

Query: 635  LSRLSGDFAQSLARLEDEIYEIAGEKFTIGSPKQLGDILFGKMGLSGAKKTATGQWATGA 694
             +    +    L R+  E+Y+ AG +F I S +QLG++LFG +GL    KT  GQ  T  
Sbjct: 636  FAAFLDEVQHELDRITQEVYKAAGGQFNIRSAQQLGELLFGTLGLPTVGKTRGGQATTSQ 695

Query: 695  GVLEELAEQGHPLPSKILEWRQLSKLKSTYTDSLPAYVNPQTQRVHTSFALAATTTGRLS 754
              LE+L+ + HP+   IL++R+L KL+STY + LP  V+    R+H++F   AT TGRLS
Sbjct: 696  DALEKLSGR-HPVVDLILDFRKLEKLRSTYLEPLPKLVDA-AGRIHSTFNQLATATGRLS 753

Query: 755  SSEPNLQNIPIRTEAGRKIRTAFVAEKGYKLVSADYSQIELRLLAHIAEIPQLRQAFADG 814
            SS PNLQNIP R + GR++R+ F A +G  LVSADYSQIELR+LAH+++ P L  AF +G
Sbjct: 754  SSNPNLQNIPARGDLGRRMRSCFTAAEGNLLVSADYSQIELRVLAHMSQDPTLLAAFREG 813

Query: 815  IDIHAMTASEMFGVPVQGMPSEVRRRAKAINFGIIYGISAFGLANQLGIGREEASAYIRK 874
             DIH  TA  ++    + +  + RR AK INFG+IYG+    L  +L I   EA  +I +
Sbjct: 814  ADIHRRTAGLLYDTAPEDVTPDQRRNAKTINFGLIYGMGPQKLGQELRITVNEAKQFIER 873

Query: 875  YFERFPGIRDYMEQTKTFVRANGHVETIFGRICHFPAVASKNPSERAFVERQAINAPIQG 934
            YF R   +R++ +  +   R  GHV T+ GR    P + S+N   R+   RQAIN  IQG
Sbjct: 874  YFSRLQHLRNFYDNVEAAAREQGHVTTLAGRRRLLPEMHSENTQLRSQARRQAINTLIQG 933

Query: 935  SAADIIRRAMIRMEDALAAARLDVRMLLQVHDELVFEVPDAQVEAALPVITKVMVEAPHP 994
            SAADII+ AM+   D      L  R++LQVHDEL+ EVP+A  +AA   +  +M E    
Sbjct: 934  SAADIIKLAMLAAHDDPVLHGLKARLILQVHDELMLEVPEANAQAAGERLALLMSEVRPG 993

Query: 995  AVQLRVPLQVDARAAGNWDEAH 1016
             V L VPL VD  A  +W  AH
Sbjct: 994  GVTLDVPLLVDWGAGKDWGSAH 1015



 Score =  138 bits (347), Expect = 2e-36
 Identities = 119/389 (30%), Positives = 180/389 (46%), Gaps = 41/389 (10%)

Query: 23  LFLVDGSNFIFRAYFQSINQDRKYNVRSDGLPSGAVRLFATKLFQFVREGVLGVRPTHLA 82
           L+L+DGS FIFR ++   N  R     SDG P+ A+ +    L + +RE     +P H A
Sbjct: 14  LWLMDGSAFIFRGFYAFQNMQR-----SDGFPTNALFIVTRILLRLLREE----KPRHFA 64

Query: 83  IVFDKSENSFRKAIYPAYKGNRSDPPPDLIPQFPLMREAVRAFGLLPVEQDVYEADDLIA 142
            V D    +FR  ++P YK  R+  P  L+ Q   +R  V A GL     D  EADD IA
Sbjct: 65  FVLDGKGPTFRHDLFPLYKAQRAATPEPLVQQLEPIRRMVTALGLPLEVSDGCEADDCIA 124

Query: 143 TYAKQAREAGADVLIVSADKDLMQLVRPGVAMYDPASGDAKKG--AGFRAERRIGEPEVV 200
           + A + R+    V+I+ ADKDL Q + P V ++DP + + K    A F AE         
Sbjct: 125 SLAARYRDE-RPVVIIGADKDLKQCLHPNVVLWDPGAKEEKLTTLASFTAET-------- 175

Query: 201 EYFGVMPDKVTDVQALAGDATDNVPGAPGIGIKTAAQLIGEYGDLDTLLARAGEIKQPKR 260
              G+ P +  DVQA+ GD +DN+PG PG+G KTA+++  ++  L+ +  R G  + P  
Sbjct: 176 ---GLTPAQWPDVQAVIGDTSDNIPGIPGVGPKTASKIFADFPTLEDI--RDGFDRLPPN 230

Query: 261 RETLTNPEIVEKIRISHKLVSLVDDVVVETPLEDLTLGQPDPVRLVAFLKAMEFTTITKR 320
            +      + + + +  +L +L  D   +   E L++   D      FL+  E   +++ 
Sbjct: 231 LQKKFEQHL-DAMFLYRQLTTLAIDRCADLTPERLSVQPLDARTASTFLQEFELRALSRE 289

Query: 321 V-GEAYEADV-AAIDADADLAPGGTRAAELKALHVGADAAGEAPSVAEMARAAVTQPVST 378
           + G      V  A+  DA  AP          +  GA AA  APS    + +    P S 
Sbjct: 290 LAGMVRNGHVQVALPGDAS-AP----------MDTGAMAAPAAPSTPRPSDSGT--PGSL 336

Query: 379 TGGEGWLKPADLAAARKGEALAAKIDRTG 407
            G  G   P D   A + +A       TG
Sbjct: 337 FGEGGVPLPWDTDDAPRNDAEHTPAGATG 365