Pairwise Alignments

Query, 190 a.a., sigma-70 family RNA polymerase sigma factor from Bosea sp. OAE506

Subject, 190 a.a., RNA polymerase sigma factor from Burkholderia phytofirmans PsJN

 Score =  139 bits (351), Expect = 2e-38
 Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 5/174 (2%)

Query: 7   EAVLHPAFMAGLEGDAGAYRRFLGLIGGRLRGFLRGHLARAGIASAEEAEDVLQETLLAL 66
           E  L   F+ GL+G+A AY+ FL  + G LRGFLR  L        ++ ED++QE LLA+
Sbjct: 14  EERLKALFVRGLDGNAAAYQAFLSDLTGHLRGFLRKRL----FYLQDDVEDLVQEILLAV 69

Query: 67  HLSRHTYDPAVPVSAWAHAIARYKLIDHLR-RSGRHRGHLQIEDEALSQAAPGSAASDAK 125
           H  RHTY P  P++AW HAIARYKL D  R RS R   H+ ++DE    A      ++A+
Sbjct: 70  HNGRHTYRPDQPLTAWVHAIARYKLADFFRARSRREALHMPLDDELEIFATCDVEPAEAR 129

Query: 126 LDVERALAALPERTRTLIDRVKLQGGSLADAAQATGMTENAAKVALHRGLKAMA 179
            D+ + L  LP+R R  I  VKL+G S+ + A+ TG++E+A KV +HRGLKA+A
Sbjct: 130 RDLSKLLEQLPDRQRLPILHVKLEGLSVTETAKLTGLSESAVKVGVHRGLKALA 183