Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Bosea sp. OAE506

Subject, 317 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  360 bits (923), Expect = e-104
 Identities = 172/318 (54%), Positives = 237/318 (74%), Gaps = 1/318 (0%)

Query: 1   MWHYIARRIVYAIPIAIGVTVFCFALVFLAPGNPVQMLLPADASQEVVDLIMKTYGFDRP 60
           M  ++ RR+ Y IPI +GV++ CFALV ++PG+P+  +LP DAS E+   +M  YGFDR 
Sbjct: 1   MLTFLIRRVAYTIPIMLGVSLVCFALVHISPGDPLVSILPPDASVELQQQLMAIYGFDRS 60

Query: 61  LPVQYWTWLTRAVVGDLGVSIQSNRPVIDEVLRALGNTIFLSFGAVALAFSIAFVLGTLA 120
            P Q+  WL RAV GDLG SI + RPV  EVL A+GNT+ L+  A  + F+   + G +A
Sbjct: 61  YPEQFIRWLGRAVQGDLGNSIATGRPVTAEVLNAVGNTLILAVTATIIGFTFGGLFGFVA 120

Query: 121 AYYRGSATDRGVTALSIVGVSIPNYWLGIVLVIIFAVELNWLPATGMGPRGSETFNLFEW 180
            Y+R S  D+  + +S+VGVSIP+YWLG+VLVIIF+V+L WLPATG GPRGS  +  F+W
Sbjct: 121 GYFRDSWIDKLASTISVVGVSIPHYWLGMVLVIIFSVQLGWLPATGAGPRGSSEW-AFDW 179

Query: 181 SHFKHVILPIVTLCMVPVGMITRTTRSAVSEVLGNEFVNTLRAKGLGELAVIRHALKNAM 240
            H +++ILP VT+ ++P+G++ RT R+ V+++L  E+V  LRAKGL +  V+ H +KNA 
Sbjct: 180 EHLQYLILPAVTMSVIPMGIVARTVRALVADILQQEYVTGLRAKGLLDRGVLAHVIKNAA 239

Query: 241 PQILAVMGLQFGYLMGGSILVETIFNWPGTGFLLNKAILTRDIPVLQGTILILALVFVFT 300
           P  LAVMGLQ GYL+GGSIL+ET+F+WPGTGFLL +AI  RD+P+LQGTIL+LA+ FV  
Sbjct: 240 PTALAVMGLQLGYLLGGSILIETVFSWPGTGFLLGQAIFQRDLPLLQGTILVLAMFFVIL 299

Query: 301 NLVVDLFQTAVDPRIKRS 318
           NL+VD+ Q+A+DPR++RS
Sbjct: 300 NLLVDVAQSALDPRLQRS 317