Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Bosea sp. OAE506

Subject, 328 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  218 bits (555), Expect = 2e-61
 Identities = 122/320 (38%), Positives = 188/320 (58%), Gaps = 5/320 (1%)

Query: 1   MWHYIARRIVYAIPIAIGVTVFCFALVFLAPGNPVQMLLPADASQEVVDLIMKTYGFDRP 60
           M  +I RR+V +I + + V +  F++ F   G+P+  LL  + + E ++ +    G D P
Sbjct: 1   MLAFIIRRVVQSIIVLLVVGLVAFSM-FRFVGDPIDGLLGQERTIEDIERLRAQLGLDDP 59

Query: 61  LPVQYWTWLTRAVVGDLGVSIQSNRPVIDEVLRALGNTIFLSFGAVALAFSIAFVLGTLA 120
             VQYW +L+RA  GDLG+S + +RPV + +L     T+ L+  +  LA     VLG   
Sbjct: 60  FLVQYWDFLSRAFQGDLGISYRQSRPVAEILLERAPATLELALVSGVLAIFFGIVLGIFT 119

Query: 121 AYYRGSATDRGVTALSIVGVSIPNYWLGIVLVIIFAVELNWLPATGMG---PRGSETFNL 177
           A  R       + ++S++GVS+P + +GI+L+ +FAVELNWLP+ G G     G  T   
Sbjct: 120 AIRRDGFAASAIMSISLIGVSLPTFLIGILLIYVFAVELNWLPSFGRGEVVDLGGWTTGF 179

Query: 178 FEWSHFKHVILPIVTLCMVPVGMITRTTRSAVSEVLGNEFVNTLRAKGLGELAV-IRHAL 236
              S  K +ILP +TL +  + +I R  RS + EVL  +++   RA+GL E AV  RHAL
Sbjct: 180 LTASGLKALILPAITLGLYQMTLIMRLVRSEMLEVLRQDYIRFARARGLTEKAVNFRHAL 239

Query: 237 KNAMPQILAVMGLQFGYLMGGSILVETIFNWPGTGFLLNKAILTRDIPVLQGTILILALV 296
           KN +  ++ V GLQ G ++  +I+ ET+F WPG G L   AI   DIPV+   +++++++
Sbjct: 240 KNTLVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLMLISVM 299

Query: 297 FVFTNLVVDLFQTAVDPRIK 316
           FV  NLVVDL   A+DPR++
Sbjct: 300 FVGINLVVDLLYFAIDPRLR 319