Pairwise Alignments

Query, 339 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Bifidobacterium breve UCC2003

Subject, 291 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Paraburkholderia sabiae LMG 24235

 Score =  157 bits (397), Expect = 3e-43
 Identities = 93/231 (40%), Positives = 130/231 (56%), Gaps = 4/231 (1%)

Query: 48  PAGTVVLAATPIGNVGDASARLVAFLERADIVAAEDTRRLFDLARRLGVYVNGRVVAYHD 107
           PA  + + ATPIGN+ D + R +  L   D +AAEDTR    L  R G+  +  +VA H 
Sbjct: 14  PASALYVVATPIGNIADITVRALHVLGLVDRIAAEDTRNTGQLLSRYGI--SKPLVAVHQ 71

Query: 108 HNERDKADGLLDQVETGATVLVVSDAGMPTINDPGLAIVRRAIERGLPVTCAPGPSAVLD 167
           HNER+ A  ++D +  G  V  VSDAG P I+DPG  +V    E G  V   PG SA+  
Sbjct: 72  HNERESAQRIVDFLRAGERVAYVSDAGTPGISDPGAKLVDAVREAGFTVVPLPGASALAT 131

Query: 168 ALALSGLPTDRFCYEGFLPRKHAERVQYLRTLLGERRTIVFYETPHRIADSMDDLLDAFG 227
           AL+++G     F + GFLP K  +R   L  L    + +VFYE PHRI +++  L DAFG
Sbjct: 132 ALSVAGDWVSTFSFLGFLPPKAKQRAAALAPLAKHSQAMVFYEAPHRIVETVQALADAFG 191

Query: 228 PNRPMALCRELTKDYEQIRRGPIGEIRQSVIDDP--PRGEMVLVIGGASSE 276
             R + + RELTK +E + R  + E  + + +D    RGE VLV+ GA ++
Sbjct: 192 GERRLLIGRELTKLHEGLHRCTLAEGPKWLEEDTNRQRGEFVLVVEGAPAD 242