Pairwise Alignments

Query, 339 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Bifidobacterium breve UCC2003

Subject, 295 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Pectobacterium carotovorum WPP14

 Score =  211 bits (538), Expect = 1e-59
 Identities = 121/286 (42%), Positives = 169/286 (59%), Gaps = 13/286 (4%)

Query: 41  RESAVTIPAGTVVLAATPIGNVGDASARLVAFLERADIVAAEDTRRLFDLARRLGVYVNG 100
           ++    I A T+ +  TPIGN+GD + R +A L   D++AAEDTR    L +   +  N 
Sbjct: 3   QDQQADISASTLYIVPTPIGNLGDITQRALAVLASVDLIAAEDTRHTGLLLQHFAI--NA 60

Query: 101 RVVAYHDHNERDKADGLLDQVETGATVLVVSDAGMPTINDPGLAIVRRAIERGLPVTCAP 160
           R+ A HDHNE+ KAD LL ++++G ++ +VSDAG P INDPG  +VRR  E G+ V   P
Sbjct: 61  RLFALHDHNEQQKADVLLAKLQSGQSIALVSDAGTPLINDPGYHLVRRCREAGVRVVPLP 120

Query: 161 GPSAVLDALALSGLPTDRFCYEGFLPRKHAERVQYLRTLLGERRTIVFYETPHRIADSMD 220
           G  A + AL+ SGLP+DRFCYEGFLP K   R   LR L  E RT++FYE+ HR+ DS+ 
Sbjct: 121 GACAAITALSASGLPSDRFCYEGFLPAKTKGRKDKLRELGEETRTLIFYESTHRLLDSLQ 180

Query: 221 DLLDAFGPNRPMALCRELTKDYEQIRRGPIGEIRQSVIDDPPR--GEMVLVIGGASSEEA 278
           D+ +  G  R + L RE+TK +E I   P+GE+   V +D  R  GEMVL++ G   ++ 
Sbjct: 181 DISEVLGAERYVVLAREITKTWESIHGAPVGELLAWVKEDENRRKGEMVLIVEGHQVDD- 239

Query: 279 EAAAPSTLSVEDMAVLAIDRALEDGLRIKDAIAQVVQEHPLADGSL 324
                S LS E +  L + RA    L +K A A   + H +   +L
Sbjct: 240 -----SALSAEALRTLVLLRA---ELPLKKAAALAAEIHGVKKNAL 277