Pairwise Alignments

Query, 339 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Bifidobacterium breve UCC2003

Subject, 287 a.a., rRNA small subunit methyltransferase I from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  202 bits (513), Expect = 1e-56
 Identities = 112/277 (40%), Positives = 166/277 (59%), Gaps = 13/277 (4%)

Query: 50  GTVVLAATPIGNVGDASARLVAFLERADIVAAEDTRRLFDLARRLGVYVNGRVVAYHDHN 109
           G + +  TPIGN+ D + R +  L+  D++AAEDTR    L +  G+  N R+ A HDHN
Sbjct: 12  GQLFIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGI--NARLFALHDHN 69

Query: 110 ERDKADGLLDQVETGATVLVVSDAGMPTINDPGLAIVRRAIERGLPVTCAPGPSAVLDAL 169
           E+ KA+ L+ +++ G  + +VSDAG P INDPG  +VR   E G+ V   PGP A + AL
Sbjct: 70  EQQKAETLVAKLKEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAIAAL 129

Query: 170 ALSGLPTDRFCYEGFLPRKHAERVQYLRTLLGERRTIVFYETPHRIADSMDDLLDAFGPN 229
           + +GLP+DRFCYEGFLP K   R   L+ +  E RT++FYE+ HR+ DS++D++   G +
Sbjct: 130 SAAGLPSDRFCYEGFLPAKSKGRRDALKAIETEPRTLIFYESTHRLLDSLEDIVAVLGES 189

Query: 230 RPMALCRELTKDYEQIRRGPIGEIRQSVIDDPPR--GEMVLVIGGASSEEAEAAAPSTLS 287
           R + L RELTK +E I   P+GE+   V +D  R  GEMVL++ G  ++E +      L 
Sbjct: 190 RYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQEDD------LP 243

Query: 288 VEDMAVLAIDRALEDGLRIKDAIAQVVQEHPLADGSL 324
            + +  LA+   L+  L +K A A   + H +   +L
Sbjct: 244 ADALRTLAL---LQAELPLKKAAALAAEIHGVKKNAL 277