Pairwise Alignments

Query, 601 a.a., ABC transporter ATP-binding protein from Bifidobacterium breve UCC2003

Subject, 582 a.a., lipid ABC transporter permease/ATPase from Escherichia coli BL21

 Score =  300 bits (768), Expect = 1e-85
 Identities = 180/536 (33%), Positives = 285/536 (53%), Gaps = 3/536 (0%)

Query: 56  LTKIMIDDAIPNKDLGKLAMLAGGLFCLIVIYELALRYRTVAITRVGQLMLKDMRRDLFT 115
           L K ++DD     D   L  +   +  L+++  +     +  I+ V   ++  MRR LF 
Sbjct: 47  LLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRRRLFG 106

Query: 116 HIQTLPFSYFDSRPHGKILIRVVNYVNTLSDALSSGLINVFSDIFTFFVTLIVMFAIDWQ 175
           H+  +P S+FD +  G +L R+      ++ + S  LI V  +  +     I+MF   WQ
Sbjct: 107 HMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQ 166

Query: 176 LALWSLVLFPVLIIWVRVLQYFQRKAYQVLSNKQSNLNAFIHESIAGVKTTQTFAREKEQ 235
           L++  +VL P++ I +RV+    R   + + N    +     + + G K    F  ++ +
Sbjct: 167 LSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVE 226

Query: 236 FDTFQQQQDDVRTAWMAAKHIEFLMWPGVQTISVMTIAFIYFVGITGFGGVSVTTGMLIA 295
              F +  + +R   M       +  P +Q I+ + +AF+ +         S+T G +  
Sbjct: 227 TKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITV 286

Query: 296 FVGYANNFWNPVINIGNFYNQLVTCSAYLERIFETLDVKPEIANKPGATELPAIQGKVDF 355
                     P+ ++ N   Q     A  + +F  LD + E     G   +    G V+F
Sbjct: 287 VFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQE--KDEGKRVIERATGDVEF 344

Query: 356 NDVVFRYEDDGRNILNLVDFHVTPGKTIALVGPTGAGKTTIVSLLSRFYDVSEGSVTIDG 415
            +V F Y       L  ++  +  GKT+ALVG +G+GK+TI SL++RFYD+ EG + +DG
Sbjct: 345 RNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDG 404

Query: 416 HDVRDVTLESLRRQMGVMLQDTFIFSGNVRDNIRYGKLDA-TDEEIEAAAKAVHAHEFIM 474
           HD+R+ TL SLR Q+ ++ Q+  +F+  V +NI Y + +  + E+IE AA+  +A +FI 
Sbjct: 405 HDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFIN 464

Query: 475 ELPDGYDTTVEERGSTLSAGQRQLIAFARVLLADPRILILDEATSNIDTRTEEALQAGLR 534
           ++ +G DT + E G  LS GQRQ IA AR LL D  ILILDEATS +DT +E A+QA L 
Sbjct: 465 KMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALD 524

Query: 535 HLLKGRTSFIIAHRLSTIENADQIFYIDHGQIVEHGTHAELLEAKGAYYRLYESQY 590
            L K RTS +IAHRLSTIE AD+I  ++ G IVE GTH +LLE +G Y +L++ Q+
Sbjct: 525 ELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQF 580