Pairwise Alignments

Query, 483 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase from Bifidobacterium breve UCC2003

Subject, 299 a.a., dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase (NCBI) from Escherichia coli BW25113

 Score =  118 bits (295), Expect = 3e-31
 Identities = 104/295 (35%), Positives = 146/295 (49%), Gaps = 31/295 (10%)

Query: 193 LVTGCNGQLGHAI-RAYAEAHGLEGFEYTDIDEF-DFSDPKAYEAYDWSLYGTII-NAGA 249
           L+ G  GQ+G  + RA A    L  F+    D   DFS+P+       S+   II NA A
Sbjct: 4   LLFGKTGQVGWELQRALAPLGNLIAFDVHSTDYCGDFSNPEGVAETVRSIRPDIIVNAAA 63

Query: 250 YTAVDKAETAEGRPIAWKANAQGPALLAKVAKDHHITLVHVSSDYVFDGTAK-EHTETEA 308
           +TAVDKAE+      A   NA     +AK A +    ++H S+DYVF G       ET+A
Sbjct: 64  HTAVDKAESEP--EFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETDA 121

Query: 309 FAPLGVYGQTKAAGDIAVAN-APEHYILRSSWV-IGEGHNFVKTMMMLSNKVADPADKLE 366
            APL VYG+TK AG+ A+     +H I R+SWV  G+G+NF KTM+ L       A + E
Sbjct: 122 TAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRL-------AKERE 174

Query: 367 QVTVVDDQYGRLTFTKDMAEAIFH----LLDSHAPYGTYNLTGSGAVKSWADIAAEVFDL 422
           ++ V++DQ+G  T  + +A+   H     L+     G Y+L  SG   +W D AA VF+ 
Sbjct: 175 ELAVINDQFGAPTGAELLADCTAHAIRVALNKPDVAGLYHLVASGTT-TWYDYAALVFEE 233

Query: 423 TNGNG-----SKVKPISTAEYFANATNPVSPRPVNSALDLAKIGE-AGYVPADWE 471
               G     +K+  + T  Y   A      RP NS L+  K  +    V  DW+
Sbjct: 234 ARKAGIPLALNKLNAVPTTAYPTPAR-----RPHNSRLNTEKFQQNFALVLPDWQ 283