Pairwise Alignments

Query, 1020 a.a., ribonuclease E/G from Bifidobacterium breve UCC2003

Subject, 489 a.a., ribonuclease G from Escherichia coli BL21

 Score =  288 bits (736), Expect = 8e-82
 Identities = 159/421 (37%), Positives = 254/421 (60%), Gaps = 21/421 (4%)

Query: 544 MVVREKEHHTQISVVEDNILVEHYVSDIQEVQTVGNIYLGRVQNVLPSMEAAFVDIGQAR 603
           ++V      T+++ ++  IL E ++        VGNIY GRV  VLP M+AAFVDIG  +
Sbjct: 5   LLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDIGLDK 64

Query: 604 NGVLYAGEVNWDAARLEGQPRR------IELAFKSGDPVLVQVTKDPIGHKGARLTSQVT 657
              L+A ++      + G+ ++      I    + G  ++VQV KDP+G KGARLT+ +T
Sbjct: 65  AAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLTTDIT 124

Query: 658 LAGRFLVLVPSGGMTGVSRKL-SERERSRLKGIVSKIAPKDMGVIIRTAAEGASEEAIVK 716
           L  R+LV +P     GVS+++ SE ER RLK +V++   +  G IIRTAAEG  E  +  
Sbjct: 125 LPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVGEAELAS 184

Query: 717 DLESLVRQWERINAKREEFWHGKRPKL---LQGEPDVAIRVVRDIFNDDFGKLIVEGDKV 773
           D   L R W ++  ++      KRP+    L GE  +A RV+RD  + +  ++ V+    
Sbjct: 185 DAAYLKRVWTKVMERK------KRPQTRYQLYGELALAQRVLRDFADAELDRIRVDSRLT 238

Query: 774 YDRIEEYLDTMAPDLKDKLEKWDPAEHEGKDVFDKWQIDSQLRKGMERQVYLPSGGSIVI 833
           Y+ + E+     P++  KLE +   +     +FD + +++++++ +ER+V L SGG ++I
Sbjct: 239 YEALLEFTSEYIPEMTSKLEHYTGRQ----PIFDLFDVENEIQRALERKVELKSGGYLII 294

Query: 834 DRTEAMTTIDVNTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMVMIDYVDMVM 893
           D+TEAMTT+D+NTG F+G  ++L++T+   N+EA++ IARQLRLR++GG+++ID++DM  
Sbjct: 295 DQTEAMTTVDINTGAFVGH-RNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNN 353

Query: 894 PANRDLVLRRLVECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPTCKGRGF 953
             +R  VL  L + L++DR K  V   ++LGLV+MTRKR  + +      ECPTC GRG 
Sbjct: 354 EDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGT 413

Query: 954 I 954
           +
Sbjct: 414 V 414