Pairwise Alignments

Query, 338 a.a., LacI family transcriptional regulator from Bifidobacterium breve UCC2003

Subject, 330 a.a., DNA-binding transcriptional repressor of ribose metabolism (NCBI) from Escherichia coli BW25113

 Score =  135 bits (341), Expect = 1e-36
 Identities = 96/315 (30%), Positives = 148/315 (46%), Gaps = 15/315 (4%)

Query: 10  TLADVAKAANVSRSTASRALNNSPRISRETTARIKKIADSMGFIPNAQGRALAVGRNETI 69
           T+ DVA+ A VS ST S  +N    +S   TA+++     + + P+A  R+L + +  TI
Sbjct: 3   TMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTHTI 62

Query: 70  AILITEPLDELFDDPTYAMFISGITEKLSESSYLPVLLQASTDFEHHRVQQHLE---RRS 126
            +LIT   +     P Y+  + G+     E  Y  VL   +T+ +  R+ ++LE   ++ 
Sbjct: 63  GMLITASTN-----PFYSELVRGVERSCFERGYSLVL--CNTEGDEQRMNRNLETLMQKR 115

Query: 127 FDAVIDISPYANNYLLEEMYKLRIPCVMLGQMEDRSYEGIFSSIYSDDTYGARIAAQAMH 186
            D ++ +    +    E M   R P V    M+   ++G    I  +   G  +A Q + 
Sbjct: 116 VDGLLLLCTETHQPSREIMQ--RYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLI 173

Query: 187 DAGRRHPVSILGPRSNPASPDRLTGYRRVY---GDELPDDRVLFTGWDATAGFSAMMQLL 243
           D G      I GP     +  RL GYR      G  +PD   +   ++   GF AM QLL
Sbjct: 174 DKGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLL 233

Query: 244 DTHDDIDGLLAGSDRIAVGAIEAIRQRGLTVPDDIAVVGFDDHPIAGRCNPPLTTVQQPL 303
                   +  G+D +AVG  +A+ Q  L VP DIAV+G+DD  +A    PPLTT+ QP 
Sbjct: 234 SHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPK 293

Query: 304 REEGSTAADLAMRMI 318
            E G  A D+ +  I
Sbjct: 294 DELGELAIDVLIHRI 308