Pairwise Alignments

Query, 424 a.a., DNA polymerase IV from Bifidobacterium breve UCC2003

Subject, 384 a.a., DNA polymerase IV from Paraburkholderia sabiae LMG 24235

 Score =  172 bits (436), Expect = 2e-47
 Identities = 128/383 (33%), Positives = 178/383 (46%), Gaps = 47/383 (12%)

Query: 23  VLHIDMDAFYASLEVARNPGLKGKPVIIGTGP----------------------RSVVSA 60
           + H+DMDAFYAS+E+ R P L+GK V+IG G                       R VV+ 
Sbjct: 8   IAHLDMDAFYASVELLRYPELRGKAVVIGGGRNAAPETLADGTRRFARLKDYAGRGVVTT 67

Query: 61  ASYEARRYGINSAMPAARAHQLCPDGVFLPVDMAYYRMMSHRIMHEVFLTITDQFEQVSV 120
           ++YEAR +G+ SAM   +A QL PD + LP D   YR  S     EV    T + E   +
Sbjct: 68  STYEARAFGVFSAMGMMKAAQLAPDAILLPTDFDSYRHYSRLFKAEV-AKFTTRIEDRGI 126

Query: 121 DEGYMDVSGALLEWDKPSA---IGAWIRQQVAERFNVTCSVGIACNKLVAKMASTNAKPN 177
           DE Y+D++      D P     IGA I+Q V     +TCS+ +A NKL+AK+ S   KP+
Sbjct: 127 DEIYIDLT------DLPGGAADIGARIKQAVRAATGLTCSICVAPNKLLAKIGSELDKPD 180

Query: 178 GMLLIPAARSAQFVQMMPLRGIPGIGPSLEKRLNAWGVHSVAELAQMDKAALIQATGSPA 237
           G+ ++        +  +  R I GIGP   +RL   G+++V +LA      L+Q+     
Sbjct: 181 GLTILTPDDIPSRIWPLAARTINGIGPKASERLATLGINTVGDLAHA-APDLLQSNFGLK 239

Query: 238 AARGLWAASHGLDSREIATTREEKSIGSERTLTEDTRDMHIVCRLLRS---ACDEVARTL 294
            A  L   + G+D R +    E KS+  E T   D    H    L  S    C  VA  L
Sbjct: 240 YATWLTHVAQGVDERPVVVESEPKSMSRETTFERDLHPRHDRPALSESFTRLCVRVAEDL 299

Query: 295 RRKGLVARTLTVKLRFADLSYQTRSFTMEQPTDTASTLYPECVRQLKIMLGIPANAEPTT 354
           +RKG V  T+ +KLRF D S  TR  T+   T   + +       LK             
Sbjct: 300 QRKGYVGHTIGIKLRFDDFSTVTRDLTLPVATSDGAAIRRAATECLK-----------RV 348

Query: 355 PLPKLIRLAGMSTSSLSEAHATA 377
            L + +RL G+  S LS A   A
Sbjct: 349 ALSRKLRLLGVRVSGLSLASEQA 371