Pairwise Alignments

Query, 424 a.a., DNA polymerase IV from Bifidobacterium breve UCC2003

Subject, 352 a.a., DNA polymerase IV from Pectobacterium carotovorum WPP14

 Score =  177 bits (450), Expect = 3e-49
 Identities = 111/300 (37%), Positives = 161/300 (53%), Gaps = 7/300 (2%)

Query: 23  VLHIDMDAFYASLEVARNPGLKGKPVIIGTGP--RSVVSAASYEARRYGINSAMPAARAH 80
           ++H+DMD FYA++E+  NP L+  P+ IG     R V+S A+Y ARRYG+ SAM  A A 
Sbjct: 4   IIHVDMDCFYAAIEMRDNPRLRDIPLAIGGSADRRGVISTANYPARRYGVRSAMATATAL 63

Query: 81  QLCPDGVFLPVDMAYYRMMSHRIMHEVFLTITDQFEQVSVDEGYMDVSGALLEWDKPSAI 140
           +LCP    LP  M  Y+  S +I  E+F   T   E +S+DE Y+DV+ +       + I
Sbjct: 64  RLCPHLTLLPGRMEVYKSTSRQI-REIFSRYTSLIEPLSLDEAYLDVTDSPHCNGSATRI 122

Query: 141 GAWIRQQVAERFNVTCSVGIACNKLVAKMASTNAKPNGMLLIPAARSAQFVQMMPLRGIP 200
              IR+ +A+  N+T S GIA  K +AK+AS   KPNG  +I   +   F+  +PL  IP
Sbjct: 123 AEEIRRTIADELNLTASAGIAPIKFLAKIASELNKPNGQYVITPEQVDDFLLTLPLEKIP 182

Query: 201 GIGPSLEKRLNAWGVHSVAELAQMDKAALIQATGSPAAARGLWAASHGLDSREIATTREE 260
           G+G    KRL   G+H+ A++     A L++  G     R LW    G+D R+I+  R  
Sbjct: 183 GVGKVTAKRLEERGLHTCADVRVYALADLLKEFGK--FGRVLWERCQGIDERQISPDRLR 240

Query: 261 KSIGSERTLTEDTRDMHIVCRLLRSACDEVARTLRR--KGLVARTLTVKLRFADLSYQTR 318
           KS+G E+TL +D  D      L+    +E+   L+R    L      VKL+F D    T+
Sbjct: 241 KSVGVEKTLAQDIHDWEQCENLIEQLYEELEVRLKRVKPDLHIARQGVKLKFDDFQQTTQ 300