Pairwise Alignments

Query, 266 a.a., 30S ribosomal protein S3 from Bifidobacterium breve UCC2003

Subject, 253 a.a., 30S ribosomal protein S3 from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  234 bits (596), Expect = 2e-66
 Identities = 112/246 (45%), Positives = 172/246 (69%), Gaps = 13/246 (5%)

Query: 1   MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDQIRKEMSKDLERAGVSRIV 60
           MGQK+NP G+RLG+ +   S W+      G+ + + ++ED++IRK +   + + G+S+I+
Sbjct: 1   MGQKVNPIGFRLGVIKGWDSNWYG-----GKDFAEKLIEDEKIRKYILARIPKGGISKII 55

Query: 61  IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
           IERT  R+ + ++TARPG+VIG+ G E ++++ +L+KLT K +Q+NIFE+K   LDA+LV
Sbjct: 56  IERTLKRITITVNTARPGVVIGKGGQEVDKIKEELKKLTNKDIQINIFEIKRPELDAKLV 115

Query: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMHAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
            + IA+QL  R++FRRAM++A   A+  GA+GI++++SGRLGGAEM+R+E Y+EGR PL 
Sbjct: 116 GESIAQQLQARISFRRAMKQAIASALRVGAEGIKVQVSGRLGGAEMARTEHYKEGRTPLH 175

Query: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTESEFEEQQAQQNNRPG--------RRGD 232
           TLRA IDY   EA+T YG++G+KVWI+KG++   +     A   +  G        R GD
Sbjct: 176 TLRADIDYALSEAQTVYGKLGIKVWIFKGEVYGKKDLTPNAGMESSKGPGAASGDRRGGD 235

Query: 233 RRPRRG 238
           RR ++G
Sbjct: 236 RRNKKG 241