Pairwise Alignments

Query, 266 a.a., 30S ribosomal protein S3 from Bifidobacterium breve UCC2003

Subject, 233 a.a., 30S ribosomal protein S3 from Dickeya dianthicola 67-19

 Score =  227 bits (578), Expect = 2e-64
 Identities = 120/235 (51%), Positives = 164/235 (69%), Gaps = 8/235 (3%)

Query: 1   MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDQIRKEMSKDLERAGVSRIV 60
           MGQK++P G RLGI +   S W++++ +    + D +  D ++R+ ++K+L +A VSRIV
Sbjct: 1   MGQKVHPNGIRLGIVKTWNSTWYANTKE----FADNLDSDFKVRQYLNKELVKASVSRIV 56

Query: 61  IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
           IER    +RV IHTARPGIVIG++G + E++R  +  + G   Q+NI EV+   LDA+LV
Sbjct: 57  IERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKGVADIAGVPAQINIAEVRKPELDAKLV 116

Query: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMHAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
           A  I  QL  RV FRRAM++A Q+AM  GAKGI++++SGRLGGAE++R+E+YREGRVPL 
Sbjct: 117 ADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLH 176

Query: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGD----MTESEFEEQQAQQNNRPGRRG 231
           TLRA IDY   EA TTYG IGVKVWI+KG+    M   E  E+ A Q  +  R+G
Sbjct: 177 TLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKG 231