Pairwise Alignments

Query, 499 a.a., DNA repair protein RadA from Bifidobacterium breve UCC2003

Subject, 458 a.a., DNA repair protein RadA from Paraburkholderia sabiae LMG 24235

 Score =  352 bits (903), Expect = e-101
 Identities = 199/498 (39%), Positives = 286/498 (57%), Gaps = 53/498 (10%)

Query: 1   MAKSSVQYVCSECGWNGPKWYGRCPECGQWGTVEEFHEARPAAGSHTAAPGRTSRTRSAA 60
           MAK    Y C+ECG   PKW G+CP C  W T+ E     P+A           R +S A
Sbjct: 1   MAKQKTLYTCTECGGQSPKWQGQCPACHAWNTLVETVAESPSA----------HRFQSLA 50

Query: 61  VPDTARAAAKPITEIGTETVERLGTGFSEFDRVLGGGVVPGSVTLIAGEPGIGKSTLLLQ 120
                +     +++I    V R  TG  EFDRVLGGG+V G V LI G+PGIGKSTLLLQ
Sbjct: 51  KSQPVQK----LSDIEASDVPRFSTGVGEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQ 106

Query: 121 TAGNIARTVAEGQTINAAGRGQSSHRPSGLASTRAHTVLYISGEESQAQVRLRATRINAV 180
           +   IA                        +  RA   LY+SGEES AQ+ LRA R++ +
Sbjct: 107 SLAEIA------------------------SERRA---LYVSGEESAAQIALRAQRLSLL 139

Query: 181 EP-----NLLLAATTDLATVLGLIEQNKPALAIVDSAQTIVSQEVDGISGGSTQVREVAS 235
           EP     +L L A   L  +   I + +P +A++DS QTI S+ +    G   QVRE A+
Sbjct: 140 EPGSHATDLKLLAEIQLEKIQATIAEERPDVAVIDSIQTIYSEALTSAPGSVAQVRECAA 199

Query: 236 ALIDTAKTLDIPVFLVGHVTKDGSIAGPRTLEHLVDVVCQFEGDSETALRMLRAAKNRFG 295
            L   AK     + +VGHVTK+GS+AGPR LEH+VD V  FEGD+ ++ R++RA KNRFG
Sbjct: 200 QLTRVAKQSGTAIIMVGHVTKEGSLAGPRVLEHIVDTVLYFEGDTHSSFRLVRAFKNRFG 259

Query: 296 PTDEVGCFDMSGEGIEEVTDPAGLFLSGDGPESANDAPVEGTCVTFTLDGHRSLPIEVQA 355
             +E+G F M+  G+  V +P+ LFL      S ++  V G+CV  T +G R L +EVQA
Sbjct: 260 AVNELGVFAMTERGLRGVANPSALFL------SQHEQIVPGSCVLVTQEGTRPLLVEVQA 313

Query: 356 LVTNSVLPTPRRAVNGVDPSRIAMLVAVLYRHSKLNLLSNDLYISTIAGGQAKEPGSDLA 415
           LV  + +P PRR   G++ +R+AML+AVL+RH+ +     D++++ + G +  EP +DLA
Sbjct: 314 LVDAANVPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLNAVGGVKITEPAADLA 373

Query: 416 IVGALASAATSKPIARSTCAIGEISLTGQVRPVPRMEYRLREAARLGFTTAVIPPLRKPV 475
           ++ A+ S+  +KP+ +     GE+ L G++RP PR + RL+EAA+LGF+ A+IP    P 
Sbjct: 374 VLLAIHSSMRNKPLPKGLIVFGEVGLAGEIRPSPRGQERLKEAAKLGFSIALIPKANAPK 433

Query: 476 H-VDGLKLVEASTLADAL 492
             +DGL+++    +  A+
Sbjct: 434 QAIDGLQVIAVERIEQAI 451