Pairwise Alignments

Query, 499 a.a., DNA repair protein RadA from Bifidobacterium breve UCC2003

Subject, 460 a.a., DNA repair protein RadA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  323 bits (829), Expect = 6e-93
 Identities = 179/486 (36%), Positives = 271/486 (55%), Gaps = 41/486 (8%)

Query: 8   YVCSECGWNGPKWYGRCPECGQWGTVEEFHEARPAAGSHTAAPGRTSRTRSAAVPDTARA 67
           +VC+ECG + P+W G+C  C  W T+ E    R AA    A   R S    +A      +
Sbjct: 9   FVCNECGADYPRWQGQCSACHAWNTITE---VRLAASPTVARNERLSGYAGSA----GVS 61

Query: 68  AAKPITEIGTETVERLGTGFSEFDRVLGGGVVPGSVTLIAGEPGIGKSTLLLQTAGNIAR 127
             + +++I  E + R  TGF EFDRVLGGGVVPGS  LI G PG GKSTLLLQT   +A 
Sbjct: 62  KVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLAE 121

Query: 128 TVAEGQTINAAGRGQSSHRPSGLASTRAHTVLYISGEESQAQVRLRATRINAVEPNLLLA 187
            +                             LY++GEES  QV +RA R+     NL + 
Sbjct: 122 QM---------------------------KTLYVTGEESLQQVAMRAHRLGLPTANLNML 154

Query: 188 ATTDLATVLGLIEQNKPALAIVDSAQTIVSQEVDGISGGSTQVREVASALIDTAKTLDIP 247
           + T +  +  + E+ +P L ++DS Q +   ++    G   QVRE A+ L   AKT  + 
Sbjct: 155 SETSIEQICLIAEEEQPKLMVIDSIQVMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVA 214

Query: 248 VFLVGHVTKDGSIAGPRTLEHLVDVVCQFEGDSETALRMLRAAKNRFGPTDEVGCFDMSG 307
           + +VGHVTKDGS+AGP+ LEH +D     +GD+++  R LR+ KNRFG  +E+G F M+ 
Sbjct: 215 IVMVGHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTE 274

Query: 308 EGIEEVTDPAGLFLSGDGPESANDAPVEGTCVTFTLDGHRSLPIEVQALVTNSVLPTPRR 367
           +G+ EV++P+ +FL      S  D    G+ V    +G R L +E+QALV +S++  PRR
Sbjct: 275 QGLREVSNPSAIFL------SRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRR 328

Query: 368 AVNGVDPSRIAMLVAVLYRHSKLNLLSNDLYISTIAGGQAKEPGSDLAIVGALASAATSK 427
              G++ +R+A+L+AVL+RH  L +   D++++ + G +  E  +DLA++ A+ S+   +
Sbjct: 329 VAVGLEQNRLAILLAVLHRHGGLQMSDQDVFVNVVGGVKVTETSADLALLLAMVSSLRDR 388

Query: 428 PIARSTCAIGEISLTGQVRPVPRMEYRLREAARLGFTTAVIPPLRKPVH-VDGLKLVEAS 486
           P+ +     GE+ L G++RPVP  + R+ EAA+ GF  A++P    P    +G+ +    
Sbjct: 389 PLPQDLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKPPEGMLVFGVK 448

Query: 487 TLADAL 492
            LADAL
Sbjct: 449 KLADAL 454