Pairwise Alignments

Query, 227 a.a., DNA-binding response regulator from Bifidobacterium breve UCC2003

Subject, 230 a.a., Nitrate/nitrite response regulator protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  140 bits (354), Expect = 2e-38
 Identities = 83/229 (36%), Positives = 134/229 (58%), Gaps = 10/229 (4%)

Query: 1   MSEAAADRIRVAVVDDHEMFRAGVIATLRDS--FDIVGQAADVPGSVAMIAQTKPQVVLL 58
           M++  A  I++ VVDDH +FR G++A L     F+++G+A DV  ++  +A+ +P V+LL
Sbjct: 1   MTDTPARPIQLLVVDDHSLFRRGLMALLAQDLRFEVIGEAGDVGEALRCVARQRPDVILL 60

Query: 59  DVHVPGGEGGGGAEILTKSRAYSPATVFLALSVSDAPQDVGSVIRAGAQGYVTKTITGAD 118
           D H+PG  G    + +   R  +P +  L L+VS+   D+ + ++AGA GY+ KT+    
Sbjct: 61  DNHLPGVLG---VDAIPALREAAPGSRVLMLTVSENEADLVAALKAGADGYLLKTVESHH 117

Query: 119 LISSIKQVHEGYAVFSPKLAGFVLSAFQGVPAAGADG-----AAPAHDEELDRLSAREQE 173
           L  +I +V EG +V SP++   ++SA +  P    +G          D EL  LS RE E
Sbjct: 118 LCEAIVKVMEGESVVSPEMTTKLVSALRAQPTVNGNGEGGGATVATADAELASLSVRELE 177

Query: 174 VMRLIARGYTYKEVAAELFISIKTVETHVSSVLRKLQLSNRTELTRWAA 222
           ++ LIARG + K +A +L I+  TV+ HV  +LRKL L++R +   +AA
Sbjct: 178 ILHLIARGDSNKLIARQLDIAETTVKIHVQHILRKLNLTSRVQAAVFAA 226