Pairwise Alignments

Query, 391 a.a., ROK family protein from Bifidobacterium breve UCC2003

Subject, 405 a.a., ROK family transcriptional regulator from Pectobacterium carotovorum WPP14

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 91/377 (24%), Positives = 152/377 (40%), Gaps = 42/377 (11%)

Query: 14  NRRLLFRLLFPDRQLSRADLCKETGLSRATATDVTGEMIDDGLLRELGSRKRDGRGKPGT 73
           N   ++RL+     +SR +L K   L+ A+ T +  E+++  L++E   +    RG+P  
Sbjct: 17  NAGAVYRLIDKYGPISRIELSKRAQLAPASITKIVRELLEAHLVQETEYQDVGSRGRPAI 76

Query: 74  LLAIDTDVLRLICIDLSRPYVITGAVMDLRARIVERRERVLDDGDRVDL-DDVLSLVGQM 132
            L +DT+    +   +S   ++  A+ DL +++V   E  L       L D +L+ + Q 
Sbjct: 77  GLILDTEAWHYLSARISHNTLLL-ALRDLSSKLVVEEEIPLPAASPQPLLDRILNEIDQF 135

Query: 133 I-----RLAGSGLVGIGVAVPGVVSGAGRVISSSNLGWDDVE---LRDMLEGEFSLPARV 184
                 RL    L  I +  PG++  +  +I    + + DVE   +   LE    LP  +
Sbjct: 136 FIRHQKRL--ERLTAIAITAPGMIDASKGIIH--RMPFYDVEEMAIGPALEQRTGLPVYL 191

Query: 185 DNDANAALLADHFLGHGNP--NCLLVQITRGIGASVLLNDEFVDGDDHAAGEIGHVVIDP 242
            +D  A  +A+   G      N + V I   +GA V+     +        EIGH  +DP
Sbjct: 192 QHDICAWTMAEALYGASRDCQNVIQVVIDHNVGAGVITGGRILHARSRNLVEIGHTQVDP 251

Query: 243 NGPACTCGKRGCLETY--------------------------VSAIALRDRIRRDPNRRA 276
            G  C CG  GCLET                           +S   L D   +      
Sbjct: 252 YGKRCYCGNHGCLETVASTENMLELAQQRMNTSMSSLLHGSPLSVENLCDAALKGDQLAK 311

Query: 277 DILAEAGARLGEALAMPVSLLNLHDIAVYGPPDIVGETLLNACDETVNSLSRNDYQSGMR 336
           DI+ + G  +G  +A+ V+L N   I V  P +     L  A    +   S   Y   ++
Sbjct: 312 DIINDVGHNVGRIVAIMVNLFNPDKILVGSPLNKAASILHPAILGCIQQQSFPPYSHNLQ 371

Query: 337 VRRCELGDDATLRGQAV 353
           V   +  +  T+ G A+
Sbjct: 372 VEATQFYNQGTMPGAAL 388