Pairwise Alignments

Query, 391 a.a., ROK family protein from Bifidobacterium breve UCC2003

Subject, 404 a.a., ROK family transcriptional regulator from Bifidobacterium breve UCC2003

 Score =  108 bits (270), Expect = 3e-28
 Identities = 83/269 (30%), Positives = 123/269 (45%), Gaps = 16/269 (5%)

Query: 13  NNRRLLFRLLFPDRQLSRADLCKETGLSRATATDVTGEMIDDGLLRELGSRKRDGRGKPG 72
           +NR  + + L+ +   SRA + K   L+ A  T +T  +I+ G++ E G  +   + +  
Sbjct: 17  SNRSRIVKHLYHNGISSRAQIAKALELTPAAITKITARLIEAGMIEETGDLE-GSKNRRS 75

Query: 73  TLLAIDTDVLRLICIDLSRPYVITGAVMDL--RARIVERRERVLDDGDRVDLDDVLSLVG 130
             L IDT   R+I +  +RP V  G V DL   A   E    V D      + D ++ + 
Sbjct: 76  IGLKIDTARFRVIGVKFARPLVQIG-VFDLCGNALSTENLPPVYDH----TISDTITAIH 130

Query: 131 QMIRLA---GSGLVGIGVAVPG-VVSGAGRV-ISSSNLGWDDVELRDMLEGEFSLPARVD 185
           Q I         +V IG+AVPG  +   GR  + SS   W  +   +     F +P  ++
Sbjct: 131 QRISELLDDDPSIVAIGMAVPGPYLRNVGRTAVVSSMQSWRKINFINEFSTAFRVPVFIE 190

Query: 186 NDANAALLADHFLG---HGNPNCLLVQITRGIGASVLLNDEFVDGDDHAAGEIGHVVIDP 242
            DA A  LA +      H N       +  G+G  V+ N   V+G   AA EIGH+ +D 
Sbjct: 191 QDARAGALAHYLFDPAFHTNDYLAYYLVGEGVGLGVIDNGHLVNGAQGAATEIGHISVDV 250

Query: 243 NGPACTCGKRGCLETYVSAIALRDRIRRD 271
           NG  C CG  GCLE Y SA  + D +  D
Sbjct: 251 NGKPCDCGNVGCLERYCSAPVIHDMLIED 279