Pairwise Alignments

Query, 455 a.a., exodeoxyribonuclease VII large subunit from Bifidobacterium breve UCC2003

Subject, 459 a.a., Exodeoxyribonuclease 7 large subunit from Pseudomonas putida KT2440

 Score =  177 bits (449), Expect = 6e-49
 Identities = 123/411 (29%), Positives = 198/411 (48%), Gaps = 52/411 (12%)

Query: 80  SAWVTGQITQINTRRAGSAYITLRDDFEDIAMEVNGFGRFADTARQFIQ-GDRVVIHGKP 138
           S WV G+I+ +    +G  Y TL+D    +   +  F + A   RQ ++ G  V + GK 
Sbjct: 35  SVWVEGEISNLARPASGHMYFTLKDSGAQVRCAL--FRQNATRVRQALRDGLAVRVRGKV 92

Query: 139 NLWMKRTSLSLRGDTILKVGAGGSLKAMIDELRKRLKGEGLFDADHKLPLPEFPKTIGLI 198
           +L+  R    L  DT+   G  G+L+   + L+++L  EGLF A+ K PLP  P+ IG+I
Sbjct: 93  SLFEGRGDYQLILDTVEPAG-DGALRLAFEALKEKLGAEGLFSAERKKPLPAHPQRIGII 151

Query: 199 CAPQARAEGDVITNVNLRWPSVTFKVVHVHVQGEQCPGEVAQAIARLDTDPDVDVIIVAR 258
            +P      D+I+    R P V   ++   VQG +   ++ +AI RL      D +I+AR
Sbjct: 152 TSPTGAVIRDIISVFGRRAPQVELNLIPTAVQGREAIAQIVRAI-RLADSLGFDALILAR 210

Query: 259 GGGSFEDLMGFSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVP 318
           GGGS EDL  F++E V RA  AC TP++S++GHE D ++ D VAD+RA TP+ AA+ + P
Sbjct: 211 GGGSLEDLWCFNEEAVARAVAACVTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAP 270

Query: 319 DVNEQTQLITGAIDRMRLRIRSRVDNEDRLIEGYANRPSLTQP----------------- 361
           D +   Q + G   R+ LR+++R+ ++   +E    R  L  P                 
Sbjct: 271 DNSGLRQRLDGLQRRLLLRMQNRLTHDRLRLESLTRR--LRHPGERLRQRAQRLDDLDMR 328

Query: 362 ------LTMLEPHQRL----------------------IDDSIQRLDIGLRRIVDDAQLT 393
                 L + +  +RL                      +D   +RL   +R ++ D +  
Sbjct: 329 LRRAFMLNLNQRRERLARLDARLAAQHPGRNLKLLNQRLDSLAERLPRAMREVLKDRRQR 388

Query: 394 VEKAHASLTALSPQSTLNRGYAVVQSADGTVLDDASTAHIGDDITVTLKKG 444
            +    +L  +SP +TL RGY+++    G  +  A     G  +T  L +G
Sbjct: 389 FQAQLQTLQVVSPLATLARGYSILLDEQGQAIRSAEQTRNGQRLTARLNEG 439