Pairwise Alignments

Query, 455 a.a., exodeoxyribonuclease VII large subunit from Bifidobacterium breve UCC2003

Subject, 456 a.a., exodeoxyribonuclease VII large subunit (NCBI) from Escherichia coli BW25113

 Score =  164 bits (414), Expect = 7e-45
 Identities = 122/413 (29%), Positives = 193/413 (46%), Gaps = 53/413 (12%)

Query: 82  WVTGQITQINTRRAGSAYITLRDDFEDI--AMEVNGFGRFADTARQFIQGDRVVIHGKPN 139
           W++G+I+      +G  Y TL+DD   +  AM  N   R     +    G +V++     
Sbjct: 31  WISGEISNFTQPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQH---GQQVLVRANIT 87

Query: 140 LWMKRTSLSLRGDTILKVGAGGSLKAMIDELRKRLKGEGLFDADHKLPLPEFPKTIGLIC 199
           L+  R    +  +++   G G  L+   ++L+ +L+ EGLFD  +K PLP     +G+I 
Sbjct: 88  LYEPRGDYQIIVESMQPAGEG-LLQQKYEQLKAKLQAEGLFDQQYKKPLPSPAHCVGVIT 146

Query: 200 APQARAEGDVITNVNLRWPSVTFKVVHVHVQGEQCPGEVAQAIARLDTDPDVDVIIVARG 259
           +    A  D++  +  R PS+   +    VQG+  PG++ +AI   +   + DV+IV RG
Sbjct: 147 SKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDAPGQIVRAIELANQRNECDVLIVGRG 206

Query: 260 GGSFEDLMGFSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPD 319
           GGS EDL  F+DERV RA +    P++S++GHE D T+ D VADLRA TP+ AA+ V  +
Sbjct: 207 GGSLEDLWSFNDERVARAIFTSRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRN 266

Query: 320 VNEQTQLITGAIDRMRLRI-----------------------RSRVDNEDRLIEGYANRP 356
             E  + +     R+ + +                       + R+  +  ++E    R 
Sbjct: 267 QQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRM 326

Query: 357 S----------------LTQPLTMLEPHQRL--IDDSIQRLDIGLRRIVDDAQLTVEK-- 396
           S                LTQ L    P  ++      IQ+L+  L   +  AQL+  +  
Sbjct: 327 SFALENQLKRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAETL-RAQLSATRER 385

Query: 397 ---AHASLTALSPQSTLNRGYAVVQSADGTVLDDASTAHIGDDITVTLKKGVI 446
              A   L A+SP STL RGY+V  + DG VL        G+ +T  L+ G I
Sbjct: 386 FGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWI 438