Pairwise Alignments

Query, 255 a.a., ROK family protein from Bifidobacterium breve UCC2003

Subject, 225 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 63/215 (29%), Positives = 92/215 (42%), Gaps = 26/215 (12%)

Query: 1   MIETAQAFGVDIGGSGIKAAPVDLAKGDFAEPRLKILTPEVSTPQAVAKIVKQQLDH-FE 59
           M E      +DIGGS +K     +      E R       ++ P+ VA +     D  ++
Sbjct: 1   MAEDQTVLAIDIGGSHVK-----IGLSTDGEERKVESGKTMTGPEMVAAVTAMAKDMTYD 55

Query: 60  VPESAPVGIAFPAPIKPGQKLDFMANLDQSWIGVDVTEAFSEACGRPVVVVNDADAAGLA 119
           V     + + +P P+   + L    NL + W+G D   AF    GRPV +VNDA    + 
Sbjct: 56  V-----IAMGYPGPVVHNKPLREPVNLGEGWVGYDYEGAF----GRPVRIVNDALMQAI- 105

Query: 120 EVQFGAAKGQDGLVIATTLGTGIGTALIYNGALIPNTELGHIMLSPKHLDAEKYASSAVR 179
               G+  G  G ++   LGTG+G A+I      P  E+ H+    K    E Y S A R
Sbjct: 106 ----GSYNG--GRMLFLGLGTGLGAAMIVENVAQP-MEIAHLPYR-KGKTYEHYVSEAYR 157

Query: 180 ENEELGYKKWAKRLTKYYGLMEKYFNPDLFTVGGG 214
           E +  G  KW KR+      +     PD   +GGG
Sbjct: 158 EKK--GNAKWQKRVQDVVERLSAALEPDEVVIGGG 190