Pairwise Alignments

Query, 297 a.a., dihydrodipicolinate synthase family protein from Bifidobacterium breve UCC2003

Subject, 301 a.a., putative lyase/synthase (VIMSS) from Escherichia coli BW25113

 Score =  218 bits (555), Expect = 1e-61
 Identities = 110/291 (37%), Positives = 171/291 (58%)

Query: 6   QFEGVFCPSITITNADGTIDYDNWGKHLDHLIDAGIDGVLLFGSIGEFYAIDVKTKAEAV 65
           +F G+  P  +  + DGT+D     +  D LI+ G+DG+   G+ GEF  ++   +    
Sbjct: 3   KFSGIIPPVSSTFHRDGTLDKKAMREVADFLINKGVDGLFYLGTGGEFSQMNTAQRMALA 62

Query: 66  RFAVSKVAGRMKVLVGVGDTNLDNVRTLAAESEAAGADALVAVSPYYFGPSPDCAKRYFS 125
             AV+ V GR+ VL+GVG  + D    LA  ++A GAD +VA++PYY+  +P     Y+ 
Sbjct: 63  EEAVTIVDGRVPVLIGVGSPSTDEAVKLAQHAQAYGADGIVAINPYYWKVAPRNLDDYYQ 122

Query: 126 AVAKATTLPVILYNFPARTGNDLTPELVAALAAENQNIIGIKDTVDTISHTRKVIAAVRK 185
            +A++ TLPVILYNFP  TG DLTPE V  LA +N+NI+GIKDT+D++ H R +I  V+ 
Sbjct: 123 QIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENIVGIKDTIDSVGHLRTMINTVKS 182

Query: 186 VNPSFSVLSGFDEYYTVNRISGGNGVLCGLTNVEPETFVSLHHAWQSGDYATAVKSAERI 245
           V PSFSV  G+D++     + GG+G +    N  PE  V ++ AW+ GD ATA    +++
Sbjct: 183 VRPSFSVFCGYDDHLLNTMLLGGDGAITASANFAPELSVGIYRAWREGDLATAATLNKKL 242

Query: 246 SYLMRLYDTADLFISAIKGAVKAKGLPIDTSIHEPAVQLTDEQYRNIQSIL 296
             L  +Y     F+S IK +++  GLP++T    P ++ ++E    +  +L
Sbjct: 243 LQLPAIYALETPFVSLIKYSMQCVGLPVETYCLPPILEASEEAKDKVHVLL 293