Pairwise Alignments

Query, 481 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Bifidobacterium breve UCC2003

Subject, 452 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  235 bits (599), Expect = 3e-66
 Identities = 150/411 (36%), Positives = 222/411 (54%), Gaps = 20/411 (4%)

Query: 22  GSAIEATETVTDSRQAGSGAVFVAIKGERVDGHDFVDKVADQGAAAAIVDHEVACTTMPQ 81
           G+ +     +TD+R+   G +FVA+KGER D HDF DK    GA A +V   +    +PQ
Sbjct: 19  GADLTLDTVITDTRKVTPGCLFVALKGERFDAHDFADKAKANGAGALLVSRPLDID-LPQ 77

Query: 82  IVVEDTVAALGLLAKHNIDRRRQLPGAFDLIGLTGSVGKTTTKDLLSALLSTLGPTVAPI 141
           ++V+DT  A G LA      R Q+P    ++ LTGS GKT+ K++ +A+LS  G T+   
Sbjct: 78  VIVKDTRQAFGQLAAWV---RMQVPAR--VVALTGSSGKTSVKEMTAAILSQCGNTLYTA 132

Query: 142 GSFNNEIGLPLTALRVNADTRFFVAEMGANHIGEIARLTRIAPPNTVIVLRVGVAHLGEF 201
           G+FNN+IG+P+T LR+N D  + V E+GANH GEIA    +  P   +V  +  AHL  F
Sbjct: 133 GNFNNDIGVPITLLRLNHDYDYAVIELGANHQGEIAWTVSLTRPEAALVNNLAAAHLEGF 192

Query: 202 GSRERIAQAKSEIVQGLLPGGTAVLNADDDYVVPMAQLASGDVLWFGQGHTHDSEVHADH 261
           GS   +A+AK EI  GL   G A++NAD++  +    +    ++W    +  +S+  A +
Sbjct: 193 GSLAGVAKAKGEIYTGLPENGIAIMNADNNDWLNWQSIIGDRLVWRFSPNAANSDFTAAN 252

Query: 262 IAADAADHAEFTMTDAHGEQVAVHLGIPGRHNVMNALAAATVALRYGMPLTAIAQTLAAQ 321
           I    +   EFT+    G  + V L +PGRHN+ NALAAA +++  G  LTAI   LAA 
Sbjct: 253 IHV-TSHGTEFTLQTPMG-SIDVLLPLPGRHNIANALAAAALSMAVGATLTAIKAGLAAL 310

Query: 322 HTISPHRMALSTVSRQGASFELIDDSFNANPDSMKAGLDGLRAWNANDGRQPFRVALLGA 381
             +      +     Q     ++DD++NAN  SM A +  L           +RV ++G 
Sbjct: 311 KAVPGRLFPIQLSENQ----LVLDDAYNANVGSMTAAVQVLSEMPG------YRVLVVGD 360

Query: 382 MLELGADERELHASVGEYAAGLGLDAIITVGSPSDA--HLNVLAESLAEGA 430
           M ELGA+    H  VGE A   G+D +++ G  S A  H + + E  A+ A
Sbjct: 361 MAELGAESEACHLQVGEAAKAAGIDRVLSTGKLSQAISHASGVGEHFADKA 411