Pairwise Alignments

Query, 481 a.a., UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase from Bifidobacterium breve UCC2003

Subject, 449 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  144 bits (364), Expect = 5e-39
 Identities = 138/486 (28%), Positives = 213/486 (43%), Gaps = 64/486 (13%)

Query: 6   KTVVIAGLGVSGTSLAEVLRERGAHVIGVD---------ERKSDADLHSFDEVDWDQ--- 53
           K + I G G SG   A + +  G  V   D         ++  DA +  F+E   D    
Sbjct: 2   KRIAILGAGESGIGAALLAKVNGYEVFVSDGGSIKEHRKQQLEDAGV-DFEEGGHDAERL 60

Query: 54  --VDYVMASPVFNPRTPFILEAQRRGIPVMSEVEFAWCLRADNARTGKPAPWIGITGTNG 111
                ++ SP      P +  A  + IPV+ E+EFA+               I ITGTNG
Sbjct: 61  LGFPEMIKSPGIPYSHPVVKAAMEQDIPVIDELEFAYGFSRGRV--------IAITGTNG 112

Query: 112 KTSTTEMTSEMLTACGLDAPTAGNIASGDMSMSLSRCATNPKHDVLCVELSSFQLHFTDS 171
           KT+T  +T  ++   GLD    GN+     S  +        HD   +E+SSFQ+    S
Sbjct: 113 KTTTAMLTYHLMKTGGLDVGLGGNVGQSWASQLVQG-----DHDWWVLEVSSFQIDGFRS 167

Query: 172 LELDCAAITNIADDHLDWHGGR-ENYAADKSKVFRAARRV--IAYNAQDAKVSELAQAAP 228
           L+   A +TNI  DHLD +  + ++Y   K  + +         Y  +D    +      
Sbjct: 168 LKPKVAVLTNITPDHLDRYDYKMDHYVQSKLGLLKQMDEEDDFIYYREDQHTWQ------ 221

Query: 229 VAAGCRKVGFTLNEPEAGQIGIADGWIVDRSGVAGGKV-GEPIKLAAIADFTHLMEPDGS 287
              G  ++      P+  +I +      +  G  GG   G  +KL        + E + +
Sbjct: 222 ---GMSQINV---RPKIHEISL------ETIGKDGGLFNGTEVKLNFRNHMISIPEREMA 269

Query: 288 LYP-HLVADALTALVLVLGLGADRETALEALQTFKPGGHRIETVAEARVNGGAIRFVDDS 346
           +   H + + + A    L  G   E     L  FK   HR+E V E       + F++DS
Sbjct: 270 MKGNHNMLNVMCASTAALLAGISEEALKAGLADFKNAPHRMELVRELE----GVTFINDS 325

Query: 347 KATNGHAANASLSSFSAKSVVWIAGGLAKGSRFEDLVSNQAHTIKAAVIIGKDQQPMIEA 406
           K TN  A   +LS+F  + ++WIAGG+ KG+ +E L+      +K  + +GKD + +  A
Sbjct: 326 KGTNVDATVYALSTFK-EPLIWIAGGVDKGNDYETLMPVVKDHVKVLICLGKDNKKLKTA 384

Query: 407 FRSQAPDIPVTVIDPQDNDTVMDRAVAACGDYAAAGDVVLMAPACASMDQFVSYADRGNR 466
           F    P+I    ++ Q+    M  AV    +  A GDVVL++PACAS D F +Y DRG++
Sbjct: 385 FEGVVPEI----LETQE----MAAAVQWGLEKGAKGDVVLLSPACASFDLFKNYEDRGDQ 436

Query: 467 FAAAAK 472
           F  A K
Sbjct: 437 FKEAVK 442