Pairwise Alignments

Query, 1215 a.a., chromosome segregation protein SMC from Bifidobacterium breve UCC2003

Subject, 1184 a.a., chromosome segregation protein SMC, common bacterial type from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  385 bits (989), Expect = e-110
 Identities = 308/1247 (24%), Positives = 570/1247 (45%), Gaps = 114/1247 (9%)

Query: 1    MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS 60
            M L +L ++GFKSF    T+ F+ GIT +VGPNG GKSN+VDA+ WV+GEQ  + LR   
Sbjct: 1    MQLTKLEIKGFKSFGDKVTIHFDKGITGIVGPNGCGKSNVVDAIRWVLGEQKTRMLRSDK 60

Query: 61   MEDVIFAGTSSRPPLGRAQVSLTIDNSDHTLDIDYTEVTISRTIFRNGGSEYAINGSQCR 120
            ME+VIF GT +R P   A+VSLT +N+ + L  +YT VTI+R  +R+G SEY +NG  CR
Sbjct: 61   MENVIFNGTKNRKPTNMAEVSLTFENTKNLLPTEYTHVTITRRYYRSGDSEYLLNGIACR 120

Query: 121  LLDIQELLSDTGLGQQMHVIVGQGRLDAILKADPSGHRAFIEEAAGILKHRKRKERALRK 180
            L DI  L  DTG+    + I+    +D +L    +  R   EEAAGI K + RK+  L+K
Sbjct: 121  LKDINNLFMDTGIQSNSYAIIELKMIDELLNDKNNSRRDLFEEAAGISKFKTRKKETLKK 180

Query: 181  LANTESNLNRLDDLLREIHRQLGPLGRQAR-------ISRRADAIQVSVRDAQARIYAED 233
            L +T+++L+R++DLL EI + L  L +QA+       I +   A  +++     + + ++
Sbjct: 181  LDDTDADLDRVEDLLYEIEKNLKSLEKQAKQAAKYFEIKKSYKASSIALAKKSVKTHTDN 240

Query: 234  AQRSMARRETVRKELGDVRSQLSVAQRELAQVKVRIEQVEALSSESSPAIAKTNQYWHEF 293
               +  +          + ++++  + EL + K  +   E L S     + +      +F
Sbjct: 241  LINTNEKITAENDRKLQINNEITTKEAELEKFKSDLIHKEKLLSTRQKTLNEHVNKIRQF 300

Query: 294  SQIRERLHALAQLAEERGHSLTGQIVSNFGEDPDMLLKRAKELETQAAAQTKAVADARIA 353
               ++  +   +  E+R   L  QI      D D           ++  Q K VA+  +A
Sbjct: 301  ESEKKIKNERLRFLEDRALKLREQI------DQDRKSNDRAGFSIRSLEQEKEVAEKLLA 354

Query: 354  LDKATEERADDEKKLASIRQTLTELRKTAQERDAHIASLRELIAREESAVQLADSRAKDH 413
              + T +   +E +       + + R+    +D   AS ++ I +    +++   +    
Sbjct: 355  EKELTVQGLKEEYEEQKSAHAIQQERQKVLSKD--YASRKDTIYQLSKELEIKQIQLSSL 412

Query: 414  TGQRETLAKQHDDAQHQLESLRSEAQSVADDDGAALDKARAALAERRDVLNELTDRQRDV 473
              + E  A   D  +  L S       + D+  A  D+ +   ++  D   ++ D  R +
Sbjct: 413  KQELEKTASDDDSQEANLASFEERMVLLKDELDAKTDQLQRLKSQEEDQNQKIEDANRTI 472

Query: 474  Q---SKIISLQAKADALSDTLD-----SRNASG---SLERDEQVASLGR----LTDFIHV 518
            +    ++  L  K DA  +  +       N  G   +++  ++ +S G+    L+D +  
Sbjct: 473  ELIREEVTQLGRKLDAKQNEFNLTKSLVENLEGFPEAIKFLKKKSSWGKDTPLLSDILTT 532

Query: 519  ADGWEEAVAHALDQYASAIVVPETGNMLHALERAREDKLGKAVVLTVMPADEPFAALADT 578
            ++ +  A+ + L+ Y +  VV      + A+    +   GKA    V+   E F    + 
Sbjct: 533  SENYRVAIENYLESYMNYYVVETEAQAIAAVNLLSDAARGKANFF-VLEHFERFRPAQNK 591

Query: 579  DICLANLVTANPEASDKTQ--AAACVRTVQLLLADVAAAETADEAQRLVASGKAPRAVTK 636
                A   T   E  +K     +  +  V ++  ++      ++A  +  SGK       
Sbjct: 592  LFANAIAATEIIEFDEKYSKLISYILDDVYIVRGEITDIPQDNDAIFITESGK------- 644

Query: 637  HGETFAHGVAAVGGSSISQSDLSLAARRDKALAQVKQLGVEANELAEQVSEAKSKRDEAA 696
                F     ++ G S+   +     +R      +++L VE  EL ++VS A+S  D+  
Sbjct: 645  ----FTKRKFSISGGSVGLFE----GKRIGRAKNLEKLEVEIKELHKKVSAARSNLDK-- 694

Query: 697  RLVDQESAKRTEVRLKAQQAEKSLKSAEDRVASFARQLEQLDKKIADTQENRNEHQLKLD 756
             + D    K    +   +  +  +     +  S   + EQL + ++     R +   K++
Sbjct: 695  NVSDLMKLKEVSYKKDIENLQSEISEVNQQYISIKTKKEQLAEMLSTNANKREDILEKIE 754

Query: 757  DLNRALESAQQSTDEHAD-FDELDERERTLERDLNLTREHEVAAK--------IAWTEAS 807
             L+  ++       E  D FD ++E E  +  D  L  E  +A +        I + +  
Sbjct: 755  SLSAEVDEIGPKLQEAKDGFDGMEE-ELEIMNDHLLQEEESLAVRSSNYNQENIQYHQHL 813

Query: 808  RKGESLTRQAGLLR---DNAKEAVER-RARIESLNERRRDQAAHLQGVADDAREVAAMVE 863
             K  SL ++    +   +N+K+ +E+ +  + S+++  +    + +   D+  E+    E
Sbjct: 814  NKVNSLEQEISFKKTAFENSKDRIEKSQGELSSIDQEIKGLLDNNEIKDDELIELYTEKE 873

Query: 864  RTLQGVAAERDKLQEAASSHDDELKTLRAQRNEIEPKVTDLTGREHALDVNRERLAAEAG 923
                GV         +    D+  K +RA   + E   T +   ++AL+  + +L++   
Sbjct: 874  AIETGVTEAEKNYYASRGDIDEMEKGIRAISKQKEGIDTIIMELQNALNEIKLKLSS--- 930

Query: 924  QLMQKVSDELGLTLEELVREYGPDQPVPVLDDDGNPVPLEHMDGEGDGNADDAATDAPDA 983
             + +++S E  + L+ L+ E                          D   D+A  +    
Sbjct: 931  -MKERLSVEFEIDLDALMEE--------------------------DPEVDEAYQEK--- 960

Query: 984  AANSVTDPSRFQTVPYNRQEQQKRLDKARRDLAALGKINPLATEEFEALEERNKYLNDQR 1043
                            + ++ ++ + KA++ L  +G INP+A E ++ ++ER+ ++  Q+
Sbjct: 961  ----------------STEQIREEVSKAKQKLEKIGPINPMAMEAYDEIKERHVFITSQK 1004

Query: 1044 NDVVKSRDDLMQLIKDLDSTMVEVFKSAFDDTAEAFEKMFATLFPGGTG-RLRLENPEDL 1102
             D+ K+++ LM  IK++D+   E F  AF+     F K+F +LF       L+L +P++ 
Sbjct: 1005 EDLTKAKNSLMDTIKEIDTVAKETFLEAFEQIKTNFIKVFRSLFTAEDDCDLKLTDPDNP 1064

Query: 1103 LTTGVLVEASPAGKRVKQLSLLSGGERSLTALALLFAIFTARPSPFYVMDEVEAALDDVN 1162
            L + + + A P GKR   ++ LSGGE++LTA +LLF+I+  +P+PF + DEV+A LDD N
Sbjct: 1065 LESTIEIMAKPKGKRPLTINQLSGGEKTLTATSLLFSIYLLKPAPFCIFDEVDAPLDDAN 1124

Query: 1163 LTRLIDAFNELRAHAQLIIITHQQRTMSIADALYGVTMRADGVTAVV 1209
            + +      +    +Q II+TH +RTM+  D +YG+TM   GV+ VV
Sbjct: 1125 IDKFNQIIQKFSHESQFIIVTHNKRTMASTDIIYGITMIEAGVSRVV 1171