Pairwise Alignments

Query, 246 a.a., (p)ppGpp synthetase from Bifidobacterium breve UCC2003

Subject, 744 a.a., (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) from Escherichia coli BW25113

 Score = 51.6 bits (122), Expect = 4e-11
 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 13/118 (11%)

Query: 79  RLKSVNSIIGKLERKGLPLSVNSIKDNLFDVAGIRVICNYRDDVYSVSNYLSSQSDIQVL 138
           R K + SI  K+++K L        D LFDV  +R++     D Y+    + +       
Sbjct: 252 RPKHIYSIWRKMQKKNLAF------DELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPD 305

Query: 139 RVKDYIKNPKQNGYRSLHVIYAVPVFLSSGAHYTPVEVQFRTIAMDYWASLEHALRYK 196
              DY+ NPK NGY+S+H +         G     VE+Q RT  M   A L  A  +K
Sbjct: 306 EFDDYVANPKPNGYQSIHTVVL-------GPGGKTVEIQIRTKQMHEDAELGVAAHWK 356