Pairwise Alignments

Query, 285 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 280 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  123 bits (308), Expect = 5e-33
 Identities = 73/263 (27%), Positives = 141/263 (53%), Gaps = 4/263 (1%)

Query: 26  LIALLLFLAAPLLWQISLAFKGPKDDMYAAPYLIPVDPTIQNFVDVFNRL--PLLFYVCN 83
           L   L+    P    +  +FKG K+ +   P L+P   T++++VD+FN +  P + Y  N
Sbjct: 17  LALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFNPMIFPFVDYFRN 76

Query: 84  TLIVAALNIGGNIISGCFAGYSIALLKFKGKGLVVGLLFLSMLVPGETILISQFLIIRNL 143
           +L+V+ ++    +  G    Y+++ L+FKG+  +    +   +  G  +++  F II  L
Sbjct: 77  SLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGILLVVPLFKIITAL 136

Query: 144 QLQNNLIGVALPGLVSSMNILLFM--NAFKAIPREMIEAAEVDGANVWQRFWRVCVPQVK 201
            + +  + + +  +  ++   +FM  + F  IP E+ EAA +DG N  Q  +R+ VP   
Sbjct: 137 GIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAM 196

Query: 202 GTMALVGIFSFMGSWNDFLWPLIVLTDDSHYTLTLGMSRLQGTFVSDPRVVAAGTIIALV 261
             +  V ++ FM +WND+L+  I L+  S++TL +G++ L  T       + A +++  +
Sbjct: 197 SGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTAL 256

Query: 262 PIMIFFLVFQRYIFNGLEAGSVK 284
           P++I + + +R+I +GL AG VK
Sbjct: 257 PVVIMYALSERFIKSGLTAGGVK 279