Pairwise Alignments

Query, 389 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN from Bifidobacterium breve UCC2003

Subject, 388 a.a., Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  207 bits (527), Expect = 4e-58
 Identities = 136/355 (38%), Positives = 198/355 (55%), Gaps = 20/355 (5%)

Query: 38  LHFVDMTPAQRIEKAAELGLPKFRVKQLANHYFGHFDVNAAEFTDFPAAKRD---EAAAA 94
           ++ +D+   Q  E    LG   FR  Q+    + +   N  E TD     R    E A  
Sbjct: 22  INLLDLNRQQMREFFKNLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEI 81

Query: 95  FFPQLITEVTRQVADEGTTIKTLWKLFDGSL-IESVLMRYPTRTTLCISSQVGCGMGCPF 153
             P+++ E   Q + +GT IK  W +  G   +E+V +    R TLC+SSQVGC + C F
Sbjct: 82  RAPEVVEE---QRSSDGT-IK--WAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKF 135

Query: 154 CATGKLGLTRNMSTGEIVEQVRVAAKMMRDGEVAGGEGRLSNIVFMGMGEPMGNYNSVLS 213
           C+T + G  RN+   EI+ QV  AAK++   +V  G+  ++N+V MGMGEP+ N  +V+ 
Sbjct: 136 CSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVT-GQRPITNVVMMGMGEPLLNLTNVVP 194

Query: 214 AVRQISAMPPEGFGISARNITVSTVGVVPGIKKLTAEGIPVRLAVSLHAPSDELRDELVP 273
           A+  +  +   GFG+S R +T+ST GVVP + KL  + I V LA+SLHAP+D +RDE+VP
Sbjct: 195 AMEIM--LDDFGFGLSKRRVTLSTSGVVPALDKL-GDMIDVALAISLHAPNDTIRDEIVP 251

Query: 274 MNKRFNTTQVLDAAHDYW---LASKRRVSIEYALMRGINDQAEHAQLLAKRLNHYGDNWA 330
           +NK++N    L A   Y     A++ RV+IEY ++  +ND  EHA  LA+ L    +   
Sbjct: 252 INKKYNIETFLGAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLK---ETPC 308

Query: 331 HVNPIPLNPIEGSKWTASKPEDEKQFLEILHRAGITATLRDTRGQDIDGACGQLA 385
            +N IP NP  G+ +  S      +F ++L   G T  +R TRG DID ACGQLA
Sbjct: 309 KINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLA 363