Pairwise Alignments

Query, 526 a.a., amino acid permease from Bifidobacterium breve UCC2003

Subject, 468 a.a., Amino-acid permease RocE from Pseudomonas putida KT2440

 Score =  477 bits (1228), Expect = e-139
 Identities = 223/442 (50%), Positives = 311/442 (70%)

Query: 59  LKRGMESRHLQMISLGGVIGTGLFLSSGYTIQQAGPIGTILAYSIGALIVYLVMLTLGEL 118
           L R ++SRH+ M+SLGGVIGTGLF+ SG TI Q GP+G ILAY +  L++YLVM+ LGEL
Sbjct: 10  LTRALKSRHIFMLSLGGVIGTGLFMGSGVTINQGGPVGAILAYLVAGLLMYLVMVCLGEL 69

Query: 119 SVAMPVTGSFHVYAEEFIGPGTGFVIAIQYWLTWTVALGSEFTAAGLLMQRWFPDSPTWV 178
           SV MPV+GSF  +A ++IGP TGF+I   YW++W   +G EFTAAG+LM RWFP+ P W 
Sbjct: 70  SVQMPVSGSFQAHATKYIGPATGFMIGWVYWMSWATTVGLEFTAAGMLMTRWFPEVPIWY 129

Query: 179 WSAACIILIFTLNALSVRFFAEAEFWFASIKVFAICAFIIIGLLAIFGIIPIAGYQHAPM 238
           WSA  ++++F LNAL+ R F EAE+WF+ IKV  I  FI+IGLL IFG IP++    APM
Sbjct: 130 WSALFVVVLFGLNALATRAFGEAEYWFSGIKVATILGFIVIGLLVIFGAIPLSSGAPAPM 189

Query: 239 FGNLVKDGIFPNGFVPVFATILTVNFAFSGTELIGVTAGETRDPETAVPKAIHTTLWRLV 298
             NLV + +FP+G   VFA ++TV +AF G E++GV AGET  PE ++P+A+   ++R++
Sbjct: 190 LNNLVGESLFPHGLSAVFAVMMTVVYAFQGCEIMGVAAGETEHPEKSIPRAVRNVVFRVL 249

Query: 299 LFFIGSITVMCALIPWRQAGVGESPFVLVFNSIGIPYAGDIMNFVVLTAVLSASNSGLYA 358
           +F++ +I V+ A++P  QAG+ ESPFV VF+ +GIPYA D+MNFV+LTA+LS  NSGLYA
Sbjct: 250 IFYVLAIAVLSAIVPHEQAGLMESPFVQVFDMVGIPYAADLMNFVILTAILSVGNSGLYA 309

Query: 359 STRMVWSMGNEGMIPRWFAKTNRCGVPMLALCAAMAGGLLALLSSVIAASTVYLVLVALS 418
           STR++W+M   GM P+  +  ++ GVP+ AL   +   L++L++S +AA T+++VL+A+S
Sbjct: 310 STRILWAMSKTGMAPKSLSPLSKRGVPLRALSITLCFALISLMTSFVAADTLFMVLMAVS 369

Query: 419 GLSAVVVWIAIAYCQIVFRRRWLASGHSADELKYRTPGYPYVSWAAFILCTASFILVIFD 478
           G+S  V WI IA  Q  FR+ WL  G    +LKY+ P YP V      LC++ F+ +  D
Sbjct: 370 GMSGTVTWIVIALAQYRFRKAWLRDGGQLQDLKYKAPLYPLVPLLCITLCSSLFVFLALD 429

Query: 479 VEQRFALVAELVFIVVCYGIYF 500
             QR +L     FI +CY  YF
Sbjct: 430 ETQRPSLYWGFGFIALCYAAYF 451