Pairwise Alignments

Query, 445 a.a., branched-chain amino acid transport system II carrier protein from Bifidobacterium breve UCC2003

Subject, 439 a.a., predicted branched chain amino acid transporter (LIV-II) (NCBI) from Escherichia coli BW25113

 Score =  254 bits (649), Expect = 4e-72
 Identities = 164/443 (37%), Positives = 236/443 (53%), Gaps = 26/443 (5%)

Query: 2   NKLVARQRLVMTFTFFSMFFGAGNLIFPPFVGAQAGSATMPAAIGFIVSAVGLPILGVLA 61
           ++L +R  + + F  F++F GAGN+IFPP VG QAG     AA GF+++AVGLP+L V+A
Sbjct: 3   HQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVA 62

Query: 62  VT-FAGGFDKLAGRVSPKFALFLGVAIMLTIGPCFAIPRTATTSFEMMVAPFVPTSYDWL 120
           +    GG D L+  +     + L     L +GP FA PRTAT SFE+ +AP    S   L
Sbjct: 63  LAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSA--L 120

Query: 121 AQLIYSLVFFSLAFLFAQHPEKLSKVLGRFMGPLLLVLIAVLFIACLVHGIGTPAKPMGD 180
              IYSLV+F++  L + +P KL   +G F+ PL ++ + +L +A +V   G+ +     
Sbjct: 121 PLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEA 180

Query: 181 YSTNQIARGFLDGYQTMDLLAALYFGIVISANIRAQQVDDESLVQKETAYAGLGTGVLLI 240
           Y     + GF++GY TMD L A+ FGIVI    R++ V +  L+ + T +AGL  GV L 
Sbjct: 181 YQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLT 240

Query: 241 VIYGALSYVGVVSGAIASIDPAKDTGATVLTNLTSSLFGTFGTAFLGVVFVIACLNVCTG 300
           ++Y AL  +G  S   AS+      GA +L       FG  G+  L  +  IACL    G
Sbjct: 241 LLYLALFRLGSDS---ASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVG 297

Query: 301 LICTCATYFHTRFQTVAGRTLSYRTWQIIFTVFSFIVSNAGLSAIIKVSVPVLSALYPIA 360
           L C CA +F           LSYRT   I   FS +VSN GLS +I++SVPVL+A+YP  
Sbjct: 298 LTCACAEFFAQYV------PLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPC 351

Query: 361 IVLVLLALT----HKKLGARFPRVYFWTVLLVGIASFATCISSLAAVFGGSIGWLDAALA 416
           I LV+L+ T    H       P ++    LL GI      +  + A     I  L +   
Sbjct: 352 IALVVLSFTRSWWHNSSRVIAPPMFI--SLLFGI------LDGIKASAFSDI--LPSWAQ 401

Query: 417 MLPLQQYQLGWVMPAIIGLAIGI 439
            LPL +  L W+MP ++ + + I
Sbjct: 402 RLPLAEQGLAWLMPTVVMVVLAI 424