Pairwise Alignments

Query, 326 a.a., shikimate 5-dehydrogenase from Bifidobacterium breve UCC2003

Subject, 288 a.a., quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) from Escherichia coli BW25113

 Score = 60.5 bits (145), Expect = 5e-14
 Identities = 86/305 (28%), Positives = 127/305 (41%), Gaps = 37/305 (12%)

Query: 8   VLGKPIAHSLSPVLHNAAYRSLNLNDWLYDKHEVGEDDLDAFLKGLDST-WAGLSLTMPL 66
           ++  PI HSLSP + N A     L  + Y   EV  D     ++GL +    G  ++MP 
Sbjct: 12  LMAYPIRHSLSPEMQNKALEKAGL-PFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPN 70

Query: 67  KRTIQPYGTPENLWAKELRVANTAVFDWNDITDDPAWPHGKPAIKLYNTDVIGIQLAFDH 126
           K+    Y         EL  A   V   N I +D  +  G      YNTD  G      H
Sbjct: 71  KQLACEY-------VDELTPAAKLVGAINTIVNDDGYLRG------YNTDGTG------H 111

Query: 127 IN--RELGNHYAGDRAGTALIIGNGNTATSALAACCMMPEIGHITVAARHPGRNAGLKPV 184
           I   +E G    G    T +++G G  +T A+ A   +  +  I +  R           
Sbjct: 112 IRAIKESGFDIKGK---TMVLLGAGGAST-AIGAQGAIEGLKEIKLFNRRDEFFDKALAF 167

Query: 185 AEKFI-NTHNPYDEIELSDTSALLNAARTATYVIN-TIPGLAANGIANVINTDSESHAEP 242
           A++   NT       +L+D  A   A  +A  + N T  G+      +++N  S  H   
Sbjct: 168 AQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHP-- 225

Query: 243 YSGLLL-DVVYNPRPTRLMQAWRAHGGRAIGGEEMLLYQALIQVLLMTGIWDDDPPSDAD 301
             GLL+ + VYNP  T+L+Q  +  G + I G  MLL+Q   Q  L TG    D P +  
Sbjct: 226 --GLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTG---KDFPLEYV 280

Query: 302 KRLQG 306
           K++ G
Sbjct: 281 KQVMG 285